FMO08760.5prime Sequence
281 bp (281 high quality bases) assembled on 2010-06-29
> FMO08760.5prime
CAGTCGACATGGGTCACCTGCAGTTGGATTTCCATTCCATACCTAAGCTC
CATGGCAGGGAGAACTATTGGCAGTGGCGCATCCTCCTGAAGACCTTTCT
GGAGGCCAACGATCTGTGGAAGCACAACGAACCGAAGGAGAGCCCAGAAA
CCAAATTCCTGATTTTGGCCAGCGTTACGGCCGATAAGATTGAGCCATCC
TACGATGATCAAAGCTGTTCGTACATTTTCCAAAACATGGAGAGTCGATT
CGGGCCTTTTAGTGCAAGCTTTCTAGACCAT
FMO08760.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34301-RA | 307 | CG34301-RA | 6..264 | 5..263 | 1280 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8773440..8773575 | 5..140 | 665 | 99.3 | Plus |
| 3R | 32079331 | 3R | 8773643..8773767 | 139..263 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:12 has no hits.
FMO08760.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:31:03 Download gff for
FMO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34301-RA | 3..272 | 1..271 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:30 Download gff for
FMO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34301-RA | 3..272 | 1..271 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:43 Download gff for
FMO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34301-RA | 3..272 | 1..271 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:43 Download gff for
FMO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8773437..8773575 | 1..140 | 97 | -> | Plus |
| 3R | 8773645..8773775 | 141..271 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:30 Download gff for
FMO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4599159..4599297 | 1..140 | 97 | -> | Plus |
| arm_3R | 4599367..4599497 | 141..271 | 96 | | Plus |
