Clone FMO08761 Report

Search the DGRC for FMO08761

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:87
Well:61
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34308-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08761.5prime Sequence

350 bp (350 high quality bases) assembled on 2010-06-29

> FMO08761.5prime
CAGTCGACATGCCACAAATAATGAATTCTAAGGACAAACGAAACCCAAAT
TATTCCGGCGGGAACAGCGGCGAGGAAGAGGATTCCTGGATGAACAGCTA
TTACACCTGCCTGGTGTGCATGCAGACTGCTGAATCGCCGAGGGTCAGTT
TTTGCGGCCACCACTTCTGCTCCCAGTGCATATACAACTGGATTAGGAGT
CAGAAATATCAGGCCAAATGCCCCTACTGCCAGTCCCTGATCGGTGAGAA
CACCCTCATCACTATCACCATGCGAAGACGAAGAACGTACTTTCGTGCAA
ATCCTTTGTGGAGCACCGCCGCCAGATGCGCAGCAAGCTTTCTAGACCAT

FMO08761.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-RB 840 CG34308-RB 88..412 8..332 1625 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13089329..13089653 8..332 1625 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:29:26 has no hits.

FMO08761.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:52 Download gff for FMO08761.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 26..360 1..338 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:48 Download gff for FMO08761.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 26..360 1..338 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:00 Download gff for FMO08761.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34308-RB 83..417 1..338 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:00 Download gff for FMO08761.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13089324..13089658 1..338 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:48 Download gff for FMO08761.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8915046..8915380 1..338 97   Plus