Clone FMO08762 Report

Search the DGRC for FMO08762

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:87
Well:62
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34309-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08762.5prime Sequence

329 bp (329 high quality bases) assembled on 2010-06-29

> FMO08762.5prime
CAGTCGACATGAAACACCAACAAGTTACGGTGGACTATTGGACCATGTTT
AAGACATCGGGATTGTGTCTTTTACTGGCCATTTGCGGATTTGTACTTCT
TAAAATGGTGCAGACCATTTTCTGGCTACCTGGACATCTGAAGAAGAACC
AGCAGCGCCTGGAGGATCTGGCCAAAATCTATGCCAAGGATATTAGCGAG
GAAGAGAGGGACGAGATCGAGAAACTGTTCAACAGTAAGGAGCCGCTGAC
TGAAGAACGAATCAACCAGTTGCTCGACAAGCCAGAGACTTCAGAGCCAA
AAAAGGAGCAAGCAAGCTTTCTAGACCAT

FMO08762.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34309-RA 588 CG34309-RA 35..337 9..311 1515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13372868..13373075 104..311 1040 100 Plus
3R 32079331 3R 13372664..13372758 9..103 475 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:18:23 has no hits.

FMO08762.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:51 Download gff for FMO08762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34309-RA 35..342 9..319 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:03:29 Download gff for FMO08762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34309-RA 35..342 9..319 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:31 Download gff for FMO08762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34309-RA 35..342 9..319 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:31 Download gff for FMO08762.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13372664..13372758 9..103 100 -> Plus
3R 13372868..13373080 104..319 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:03:29 Download gff for FMO08762.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9198386..9198480 9..103 100 -> Plus
arm_3R 9198590..9198802 104..319 98   Plus