FMO08763.5prime Sequence
293 bp (293 high quality bases) assembled on 2010-06-29
> FMO08763.5prime
CAGTCGACATGGCTTTTCTTTTTAAACTATTTACCTTCTTGGCGGTGGCC
GCCATTTTGATCCAAATGACACTTGCACTGGAGTTTATGGATGAAGACTT
TCTGGCAAACGATGACGGTCATCACTTGGACGAAGAGTCCGCTGAAGTGC
CTGGTATTTTGACTGGTTATACCAAAGATACGATCGCTCACTTTAATCCT
CGCAAAGTAGATGGGGGATTTCGACAATTGTGGGAACGTGTTCCCCTTCA
AAAAGTCGATGATATTAAGCGGAGAGCAAGCTTTCTAGACCAT
FMO08763.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42246-RB | 387 | CG42246-RB | 70..337 | 8..275 | 1325 | 99.6 | Plus |
| CG42246-RA | 578 | CG42246-RA | 70..337 | 8..275 | 1325 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7411508..7411715 | 275..68 | 1025 | 99.5 | Minus |
| X | 23542271 | X | 7411777..7411837 | 68..8 | 305 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 21:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 3915..3979 | 113..51 | 121 | 69.2 | Minus |
FMO08763.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:49 Download gff for
FMO08763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42246-RA | 65..337 | 1..275 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:03:21 Download gff for
FMO08763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42246-RA | 65..337 | 1..275 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:25 Download gff for
FMO08763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42246-RA | 65..337 | 1..275 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:25 Download gff for
FMO08763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7411508..7411714 | 69..275 | 99 | <- | Minus |
| X | 7411777..7411841 | 1..68 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:03:21 Download gff for
FMO08763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7305541..7305747 | 69..275 | 99 | <- | Minus |
| arm_X | 7305810..7305874 | 1..68 | 94 | | Minus |
