FMO08765.5prime Sequence
443 bp (443 high quality bases) assembled on 2010-06-29
> FMO08765.5prime
CAGTCGACATGCCAAAAGTGGATGAGTCCCCCATCTTCCGGCGCAAGCAT
ATAATCAGCGAGGAGCGTTCCGTATCTGTGGATCGCTTCAAGTACACGCT
AAACGATGAGGGAGGCTTCACCAGGTCCGTTCCGCTGGTTCAGGAGTATC
ACTACAGGGTGGTATCTCCTTTGGCCAGCCGACCCAGTCAGCAGCATCCG
CATAAGCCGGGATCCGGAGAAGCCCGTTTCGAGCCTCGTCTTAACCGTCG
CTCCTCGGTTCCGATCAGCATTAACTATCAAACGGTGCACGTATCGAGTC
CACATCCTCCGGAAATGGCCAGGCGCGGCTCGGTGATAAGCCTCACTGGG
CCACCACCAGAAGTCAGTGGTATGCCAAGTGGAGCCGCTGATCCAAAGCG
GCGCGTCCGCATGATAAATCGCCATGCAAGCTTTCTAGACCAT
FMO08765.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-RB | 643 | CG34219-RB | 63..480 | 8..425 | 2090 | 100 | Plus |
| CG34219-RA | 1111 | CG34219-RA | 63..480 | 8..425 | 2090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8918592..8918815 | 231..8 | 1120 | 100 | Minus |
| 2R | 25286936 | 2R | 8918339..8918533 | 425..231 | 975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:05 has no hits.
FMO08765.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:48 Download gff for
FMO08765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 150..577 | 1..430 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:25 Download gff for
FMO08765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 58..485 | 1..430 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:39 Download gff for
FMO08765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 58..485 | 1..430 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:39 Download gff for
FMO08765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8918334..8918532 | 232..430 | 98 | <- | Minus |
| 2R | 8918592..8918820 | 1..231 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:25 Download gff for
FMO08765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4805839..4806037 | 232..430 | 98 | <- | Minus |
| arm_2R | 4806097..4806325 | 1..231 | 98 | | Minus |
