Clone FMO08774 Report

Search the DGRC for FMO08774

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:87
Well:74
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34264-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08774.5prime Sequence

377 bp (377 high quality bases) assembled on 2010-06-29

> FMO08774.5prime
CAGTCGACATGGCGCGTTCCCAGTCGAAAATGATTCGGGCCGCCATGGTC
GTGGACGACCCTAATATGGTGGCCTGGCTGCCATACCTTAACTTTCTTCG
CTTTCTGAAGCGAAACTTCTATCCCAGGACTGATTTGCGCCGCTTACTTC
AGGTGGGACTCATCCGTTGGATCGCACTTAGCGATGCCCAGAAGAGGTTA
TTTGAGCCAGAACGAATCCTGGCGCGTGTGGCTCGCAGGCAAAGGAATAA
ACGACGCCGCCGACTACTTCGCCGTGCTCGGCATGGCCAGAAAGGACGTG
GTGCAGTGCGACGCCCCATCTACGACAGCCGTCCTAAACCGAGACGCCGC
AAACCGAAGGCAAGCTTTCTAGACCAT

FMO08774.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34264-RC 563 CG34264-RC 125..475 9..359 1740 99.7 Plus
CG34264-RB 587 CG34264-RB 122..472 9..359 1740 99.7 Plus
CG34264-RD 547 CG34264-RD 125..459 9..359 1490 95.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 317208..317411 9..212 1020 100 Plus
3L 28110227 3L 317465..317611 213..359 720 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 19:12:31 has no hits.

FMO08774.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:33 Download gff for FMO08774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34264-RB 114..472 1..359 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:41 Download gff for FMO08774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34264-RB 114..472 1..359 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:22 Download gff for FMO08774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34264-RB 114..472 1..359 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:22 Download gff for FMO08774.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 317200..317411 1..212 98 -> Plus
3L 317465..317611 213..359 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:41 Download gff for FMO08774.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 317200..317411 1..212 98 -> Plus
arm_3L 317465..317611 213..359 99   Plus