Clone FMO08777 Report

Search the DGRC for FMO08777

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:87
Well:77
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17150-RE
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08777.5prime Sequence

1177 bp (1059 high quality bases) assembled on 2010-06-29

> FMO08777.5prime
CAGTCGACATGCAGAAGAAGGTAGCGCCAGAGCGCCGTCCATACTGTGAT
CCTCGGCTGCAGGATGACAAGCTGAGGAGGAAACGAACTCTCCATCTGCC
CAGAGTGTCGCAGGCTCAGAAGAAGGGCGAAAAGCGCCAGCTGAACGACT
GCCCCTTCTACAACCTGACTTATGGCTTTGACCAACTGCCACTGGATCCT
GTCAAGGAGTTCCTGCAGGAGAAGATATCTCACATGCAGACAGACAAAAT
AGTGGGACATTGCAATCGGGAGTTTGATTTCCACCGATACGATTTGGATA
ACGTGAAGGATGAGTATGATGAGTGCGATGATGACAGCTTGCAGGAGCTG
CAACTGGAGGATATTATCATGCCCGAGCAGTTCGAGATGCTGCGCGATGC
CAAGGATCATTTATACAACTTTGATTCCACTGCCTGTAATCAATTTCCCT
GGATTGACAAATGGATGACTGGCGTGCGTCCCAGTGAGCAGGAGATCTAT
GAAATGACCAGCCACCTCCTGGAAATCTACTGCAATCGCAGGGTGCGCAT
CTTCTATCCGGGCTGCGGAACCAGTTCCTCCTTGTGGACAAACCAGCTGA
GGCGCCAGCACGGATCCCCTTCGGAGCTGATTGGAGCCTATCGAACTCCC
TCTGCCCGCCACATGCGGGTCAACAACATGAGAGGACCTCCCAAGAAGGA
AAAGTTCACGGCCGGCGATCATTATGCCTTTCGAACGCCGCAGAATGTCG
CAACGAACTGATGAGAGTTGGGAAAATAATTGATGAGCTAATCGAGCCAG
TGCTGAAAGCAGCAGAGCACAAAATTGGTCATGGACTCACAAAATATCCC
GATCCGCCCAGTTGTAAGGACAACACTAATCGAATCCTTAGGGCGGCAGG
TATATTGGTGGGAAAAGAAAAAGAATTGCTATGTCGGCAAGTTGTCGCAT
ACATCGTAAGGACTTTGCCACAAATGAGGAGTTTCTGCGCTGTCTCAAAG
GATGGAAGCACCCACTTTCGTAACATGCAACCCTTGCAACCGGTGGATCC
TGATGACAAAAGATCAATGTGGCTAAATACCGGAGTAGAGCTGGCAGAAC
GGAAAGCTTTTACCCTGAGAACCGAACGATACCATGTCTGGCTGAAGTGG
GATAGGATAGAAGAGCCAGGCTTCTAG

FMO08777.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG17150-RE 1656 CG17150-RE 152..1304 4..1146 5240 97.9 Plus
CG17150-RD 13807 CG17150-RD 187..1339 4..1146 5240 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4863408..4863677 474..743 1350 100 Plus
3L 28110227 3L 4861455..4861679 4..228 1110 99.6 Plus
3L 28110227 3L 4861737..4861940 229..432 1020 100 Plus
3L 28110227 3L 4863729..4863899 741..911 840 99.4 Plus
3L 28110227 3L 4863961..4864057 914..1010 390 98 Plus
3L 28110227 3L 4863291..4863333 432..474 215 100 Plus
3L 28110227 3L 4864120..4864169 1012..1061 190 92 Plus
Blast to na_te.dros performed on 2014-11-28 23:16:04 has no hits.

FMO08777.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:30 Download gff for FMO08777.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17150-RE 149..1273 1..1118 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:02 Download gff for FMO08777.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17150-RD 184..1308 1..1118 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:05 Download gff for FMO08777.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17150-RD 184..1308 1..1118 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:05 Download gff for FMO08777.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4861452..4861679 1..228 98 -> Plus
3L 4861737..4861940 229..432 100 -> Plus
3L 4863292..4863333 433..474 100 -> Plus
3L 4863409..4863678 475..743 99 -> Plus
3L 4863732..4863898 744..910 99 -> Plus
3L 4863959..4864059 911..1011 96 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:02 Download gff for FMO08777.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4863732..4863898 744..910 99 -> Plus
arm_3L 4861452..4861679 1..228 98 -> Plus
arm_3L 4861737..4861940 229..432 100 -> Plus
arm_3L 4863292..4863333 433..474 100 -> Plus
arm_3L 4863959..4864059 911..1011 96 -> Plus
arm_3L 4863409..4863678 475..743 99 -> Plus