FMO08777.5prime Sequence
1177 bp (1059 high quality bases) assembled on 2010-06-29
> FMO08777.5prime
CAGTCGACATGCAGAAGAAGGTAGCGCCAGAGCGCCGTCCATACTGTGAT
CCTCGGCTGCAGGATGACAAGCTGAGGAGGAAACGAACTCTCCATCTGCC
CAGAGTGTCGCAGGCTCAGAAGAAGGGCGAAAAGCGCCAGCTGAACGACT
GCCCCTTCTACAACCTGACTTATGGCTTTGACCAACTGCCACTGGATCCT
GTCAAGGAGTTCCTGCAGGAGAAGATATCTCACATGCAGACAGACAAAAT
AGTGGGACATTGCAATCGGGAGTTTGATTTCCACCGATACGATTTGGATA
ACGTGAAGGATGAGTATGATGAGTGCGATGATGACAGCTTGCAGGAGCTG
CAACTGGAGGATATTATCATGCCCGAGCAGTTCGAGATGCTGCGCGATGC
CAAGGATCATTTATACAACTTTGATTCCACTGCCTGTAATCAATTTCCCT
GGATTGACAAATGGATGACTGGCGTGCGTCCCAGTGAGCAGGAGATCTAT
GAAATGACCAGCCACCTCCTGGAAATCTACTGCAATCGCAGGGTGCGCAT
CTTCTATCCGGGCTGCGGAACCAGTTCCTCCTTGTGGACAAACCAGCTGA
GGCGCCAGCACGGATCCCCTTCGGAGCTGATTGGAGCCTATCGAACTCCC
TCTGCCCGCCACATGCGGGTCAACAACATGAGAGGACCTCCCAAGAAGGA
AAAGTTCACGGCCGGCGATCATTATGCCTTTCGAACGCCGCAGAATGTCG
CAACGAACTGATGAGAGTTGGGAAAATAATTGATGAGCTAATCGAGCCAG
TGCTGAAAGCAGCAGAGCACAAAATTGGTCATGGACTCACAAAATATCCC
GATCCGCCCAGTTGTAAGGACAACACTAATCGAATCCTTAGGGCGGCAGG
TATATTGGTGGGAAAAGAAAAAGAATTGCTATGTCGGCAAGTTGTCGCAT
ACATCGTAAGGACTTTGCCACAAATGAGGAGTTTCTGCGCTGTCTCAAAG
GATGGAAGCACCCACTTTCGTAACATGCAACCCTTGCAACCGGTGGATCC
TGATGACAAAAGATCAATGTGGCTAAATACCGGAGTAGAGCTGGCAGAAC
GGAAAGCTTTTACCCTGAGAACCGAACGATACCATGTCTGGCTGAAGTGG
GATAGGATAGAAGAGCCAGGCTTCTAG
FMO08777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17150-RE | 1656 | CG17150-RE | 152..1304 | 4..1146 | 5240 | 97.9 | Plus |
CG17150-RD | 13807 | CG17150-RD | 187..1339 | 4..1146 | 5240 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4863408..4863677 | 474..743 | 1350 | 100 | Plus |
3L | 28110227 | 3L | 4861455..4861679 | 4..228 | 1110 | 99.6 | Plus |
3L | 28110227 | 3L | 4861737..4861940 | 229..432 | 1020 | 100 | Plus |
3L | 28110227 | 3L | 4863729..4863899 | 741..911 | 840 | 99.4 | Plus |
3L | 28110227 | 3L | 4863961..4864057 | 914..1010 | 390 | 98 | Plus |
3L | 28110227 | 3L | 4863291..4863333 | 432..474 | 215 | 100 | Plus |
3L | 28110227 | 3L | 4864120..4864169 | 1012..1061 | 190 | 92 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:04 has no hits.
FMO08777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:30 Download gff for
FMO08777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17150-RE | 149..1273 | 1..1118 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:02 Download gff for
FMO08777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17150-RD | 184..1308 | 1..1118 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:05 Download gff for
FMO08777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17150-RD | 184..1308 | 1..1118 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:05 Download gff for
FMO08777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4861452..4861679 | 1..228 | 98 | -> | Plus |
3L | 4861737..4861940 | 229..432 | 100 | -> | Plus |
3L | 4863292..4863333 | 433..474 | 100 | -> | Plus |
3L | 4863409..4863678 | 475..743 | 99 | -> | Plus |
3L | 4863732..4863898 | 744..910 | 99 | -> | Plus |
3L | 4863959..4864059 | 911..1011 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:02 Download gff for
FMO08777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4863732..4863898 | 744..910 | 99 | -> | Plus |
arm_3L | 4861452..4861679 | 1..228 | 98 | -> | Plus |
arm_3L | 4861737..4861940 | 229..432 | 100 | -> | Plus |
arm_3L | 4863292..4863333 | 433..474 | 100 | -> | Plus |
arm_3L | 4863959..4864059 | 911..1011 | 96 | -> | Plus |
arm_3L | 4863409..4863678 | 475..743 | 99 | -> | Plus |