FMO08778.5prime Sequence
825 bp (823 high quality bases) assembled on 2010-06-29
> FMO08778.5prime
CAGTCGACATGTCTACTGCTGCCCAGTGCCCGCCTCCTCGCCCAGGCGGT
GGTGGAGGAGACACCACACTGGCCGCCCTGAGCGCTCACATGGCCCCTTG
TCGCGACACCACGCCCGAGCAGCTGGCGCAGCTGATAGACGTCCACTTGG
GGGATCTGCGCCAAGAGCAGCCCAACTGGACCATCAGCTCCTCCACGGTG
GCAGGTCGTGGGGTGTTTGCCACCCGAGACATAGCCGCCGGCGAGCTGAT
CTTCCAGGAGCGAGCCCTAGTCACCGGTCCGACGGCGAGAAAGGGCCAAC
TGAGCAGCTGCATCTGCTGTCATGAGACCCTGCCGCAAACGGGATTCCTT
TGCCGGCATCGCTGCACCCTGCCCGTATGCGAAACCTGTTCGGATTCCGA
GGAGCACCAGGCGGAGTGCGAGCACTTCCGTCGCTGGCAGCCCAAAGACG
TGGATGCGGAGCAGGAGCAGGTGAATCCTATGTCGCTGAGGATCCTCACC
GCAGTGAGGGTCTTCCACTTGGGCAAGGAACAGCGGCATCTGGTGGACGC
CATGCAAGCGAATGCGGAGCGCGCTTACCGGCGGGAGATCATCCAGGCGG
CCCAATGCTTCCGGAACTTCCCCACCACGGATCGGGTGTTCATGGACCAG
CTGTTCCGGATCGTGGGCGTGCTCAATACAAATGCCTTCGAGGCTCCTTG
CCGCTCTGGCGGCCACGAGACGCTACTGCGGGGTCTGTTCCCGCTCACGG
CGATCATGAACCACGAGTGCACCCCGAACGCTAGTCACTACTTCGAAAAC
GGTCGACTGGCGGGTGGTTCGGGTA
FMO08778.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msta-RD | 2094 | CG33548-RD | 187..1008 | 1..823 | 4075 | 99.8 | Plus |
| msta-RA | 1749 | CG33548-RA | 187..1008 | 1..823 | 4075 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2207680..2208492 | 813..1 | 4050 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:00:23 has no hits.
FMO08778.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:29 Download gff for
FMO08778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msta-RA | 187..1008 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:00 Download gff for
FMO08778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msta-RA | 187..1008 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:46 Download gff for
FMO08778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msta-RA | 187..1008 | 1..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:46 Download gff for
FMO08778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2207669..2208492 | 1..824 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:00 Download gff for
FMO08778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2101702..2102525 | 1..824 | 99 | | Minus |
