FMO08780.5prime Sequence
990 bp (990 high quality bases) assembled on 2010-06-29
> FMO08780.5prime
CAGTCGACATGGAATTTCTGGAGAACCTGTACAAAACGCTGCACTCCCTG
TTGTCCTCCTACATCGATCTGGACTATTCGCTATGGCTATATCGCTTCCT
CACCCCCCTGATTGTCACCTTTCTGCTGCCGCTGGTCTTCGTGGCCCTCA
TCTACATTTCGTTCCTGGTGCTATTCATCTACAAGCTGCACAGGCAGGTA
ATAATGCGCGCCGTGCAGGGCGATCGCAATTTTTGGCGAGTGGGCCGCAA
GATAGTGGCCGCCATTTGGGATGCACATGCTCGGATCTATCATGGCTACG
AGGTGATCGGATTGGAGAATGTGCCACAGGAGGGACCGGCGCTGATTGTC
TACTATCATGGCGCCATACCCATCGATATGTACTACTTGAATTCGCGAAT
GTTGCTGCAGCGCGAGCGTTTGATCTACACGATCGGCGATCGATTTCTGT
TCAAGCTGCCCGGCTGGGGCACCATCTCTGAGGCATTCCACGTCAGTCCC
GGCACGGTGCAGTCGTGCGTTAGCATTTTGCGGGATGGCAATCTGCTGGC
CATTTCGCCGGGCGGCGTTTATGAGGCACAGTTCGGTGATCACTACTACG
AGCTGTTGTGGCGCAATCGTGTCGGTTTCGCCAAGGTGGCCATCGAGGCA
AAGGCGCCCATCATTCCCTGCTTTACGCAGAATCTGCGCGAGGGCTTCCG
TCAGGTGGGCATCTTTCGGACGTTCTTCATGCGACTGTACAATAAGGTGC
GCATACCGGTGTATCCCATCTACGGTGGCTTTCCCGTCAAGTTTCGGACG
TATCTGGGCAAGCCTATACCCTACGATGAGAACCTAACCCCGCAGATCTG
CAATCAAGGTGGCTACGGCTATCGAGGATCTGATCAATCAACACCAGCGA
CTGCCCGGCAGCATCCTGCTGGCTCTGCTGGATCGACTGCCCACGTTTAG
GCGACGCGTACGGCGGAAGAGAGCAAGCTTTCTAGACCAT
FMO08780.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34348-RA | 2190 | CG34348-RA | 580..1542 | 9..969 | 4765 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11343243..11343897 | 191..845 | 3275 | 100 | Plus |
| X | 23542271 | X | 11340607..11340746 | 55..194 | 700 | 100 | Plus |
| X | 23542271 | X | 11343974..11344086 | 857..969 | 565 | 100 | Plus |
| X | 23542271 | X | 11340452..11340497 | 9..54 | 230 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:01:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2190..2240 | 152..102 | 111 | 68.6 | Minus |
FMO08780.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:27 Download gff for
FMO08780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34348-RA | 1..966 | 9..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:24 Download gff for
FMO08780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34348-RA | 571..1545 | 1..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:15 Download gff for
FMO08780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34348-RA | 571..1545 | 1..973 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:15 Download gff for
FMO08780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11340443..11340497 | 1..54 | 92 | -> | Plus |
| X | 11340607..11340745 | 55..193 | 100 | -> | Plus |
| X | 11343246..11343912 | 194..858 | 99 | -> | Plus |
| X | 11343976..11344089 | 859..973 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:24 Download gff for
FMO08780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11234476..11234530 | 1..54 | 92 | -> | Plus |
| arm_X | 11234640..11234778 | 55..193 | 100 | -> | Plus |
| arm_X | 11237279..11237945 | 194..858 | 99 | -> | Plus |
| arm_X | 11238009..11238122 | 859..973 | 99 | | Plus |
