FMO08781.5prime Sequence
867 bp (867 high quality bases) assembled on 2010-06-29
> FMO08781.5prime
CAGTCGACATGTTATCTGGGTTTTTGCAACGAGGCGTCCAAAGAGCACGG
TTCACCTTCACCCAGCAACTCGGCGAAGATCTTTTGAGCGTCCCAGCGGC
AACACTCCACACCCAGATACGCATGATGGATGACATTGCGCTGGACGCGG
CCAAGAAGACGGCGGCCCGCACGGCGGTGGACCAGTGGGTGACTGAGGAT
ACGAAGATTCTGGGGATTGGCAGCGGATCGACGGTGGTGTACGCCGTGCA
GCGGATCGCGGAGCGCGTGTGGAAGGAGGGCGAGCTGACGGACCTCATCT
GCGTGCCCTCGTCCTACCAGGCGCGCCATCTGATACTCGACTACAACCTT
AACCTGGGCGATCTGGACAGGAATCCCAACATAGACGTGGCCATCGACGG
GGCCGACGAGGTCGATCGCCATATGGTGCTGATCAAGGGCGGCGGCGGCT
GCTTGCTGCAGGAGAAGGTGGTGGCCTCCTGCGCCAAGCACTTCATCGTG
GTGGCCGACTACACAAAGAACTCCATCCGCCTGGGCGAGCAGTGGTGCCG
CGGCGTGCCCATCGAGGTGGCGCCCATGGCGTACGTGCCCATCAAGCTGC
ACATCGAGGCGCTTTTCGGCGGCGAGGCCTCGTTGCGTATGGCCAAGGTG
AAGGCGGGACCCATTGTCACGGACAATGGCAACTTCCTCCTGGACTGGAA
GTTCATCGCCAACAGGGAGTACGACTGGGACGAGGTCAACCGCGCCATCA
CCCTCATCCCGGGCGTCCTGGAGACGGGCCTGTTCGTGAACATGGCCCAC
AAATGCTACTACGGCATGGCCAATGGCTCGGTCAAGGTCCAGAACAAAGG
CAAGCTTTCTAGACCAT
FMO08781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpi-RB | 1010 | CG30410-RB | 53..893 | 7..847 | 4160 | 99.6 | Plus |
| Rpi-RC | 1259 | CG30410-RC | 53..893 | 7..847 | 4160 | 99.6 | Plus |
| CG30409-RB | 818 | CG30409-RB | 732..815 | 7..90 | 405 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23355235..23356075 | 7..847 | 4160 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:55:02 has no hits.
FMO08781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:26 Download gff for
FMO08781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30410-RA | 2..847 | 4..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:31 Download gff for
FMO08781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpi-RC | 48..893 | 1..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:02 Download gff for
FMO08781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpi-RC | 48..893 | 1..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:02 Download gff for
FMO08781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23355230..23356075 | 1..847 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:31 Download gff for
FMO08781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19242753..19243598 | 1..847 | 99 | | Plus |
