FMO08790.5prime Sequence
785 bp (785 high quality bases) assembled on 2010-06-29
> FMO08790.5prime
CAGTCGACATGGAATTTCCACACTTGGGACAGCACTGCAGTGAGGCAACG
TGCAACAGATTGGATTTTCTGCCCGTTAAGTGCGACTCGTGCGACAAGGT
CTTCTGCGCCTCTCACTACAGCTACGACCGCCACAGCTGTCCAGGAGCCT
ACAAGAAGAACGTTCAGGTGCCCGTCTGCCCACTGTGTCGGGAGCCCGTG
CCCACGCCACCCGGAGTGGAGCCCGATGTCACTGTTGGCCAGCACATTGA
CCAGCAGTGCAAATCGGAGAGCAAGAAGATCTACACCAATCGCTGCAATG
CCAAGGGCTGCAAGCGAAAGGAGCTCATCCCGGTGACCTGCTCGCAGTGT
CGCTTGAACTTTTGCCTGCGTCATCGACACACCAGCGACCACGACTGCAA
GCCAGTGCCTGCATCTTCGACAACGTCCAGCCGTGGGGGATTTCAGTCCA
TATTCAAGACCTCCTCGGACTCACGATCCATGGCTGCCCAGGCGGCCGAG
AGAAGGCAGAACAGAAGGCCCGCGAGCAATAGCATCAGCAATACCAATTC
CAGACCTCGACCTGTGCAGGCCACACAAGTACAAAACATACAGGGCAATA
TGAGCGAAGACGAGGCCCTAGCACGAGCACTAGCCTTATCCATTATGGAG
CAGGATGACGCGGCGGAAAGCAACCGTCAAGCTCCGGCACCAAGCAACGC
CCAGCAAGTGGCTGTTGGCGGTGGTGGCAATCAGCAGGGAAATGGCAAGG
ACAAGTGCCTGCTGTCCGCAAGCTTTCTAGACCAT
FMO08790.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-RB | 1072 | CG12795-RB | 151..910 | 8..767 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3452739..3453278 | 63..602 | 2700 | 100 | Plus |
| 2L | 23513712 | 2L | 3453428..3453593 | 602..767 | 830 | 100 | Plus |
| 2L | 23513712 | 2L | 3452616..3452671 | 8..63 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:13 has no hits.
FMO08790.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:17 Download gff for
FMO08790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 157..928 | 1..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:38 Download gff for
FMO08790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 142..910 | 1..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:28 Download gff for
FMO08790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 142..910 | 1..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:28 Download gff for
FMO08790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3452607..3452671 | 1..63 | 93 | -> | Plus |
| 2L | 3452740..3453278 | 64..602 | 100 | -> | Plus |
| 2L | 3453429..3453596 | 603..772 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:38 Download gff for
FMO08790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3452607..3452671 | 1..63 | 93 | -> | Plus |
| arm_2L | 3452740..3453278 | 64..602 | 100 | -> | Plus |
| arm_2L | 3453429..3453596 | 603..772 | 98 | -> | Plus |
