FMO08794.5prime Sequence
756 bp (756 high quality bases) assembled on 2010-06-29
> FMO08794.5prime
CAGTCGACATGTTGTTTTTCTGCCTAGCCTTGATCATCGGCTGCGCAGTC
GGAGAATACAGCGAAGTCCGGGTCATCCAGGAAGAGGACAACTTCCTGGA
GAGTCCTCACTACCTAAAAAACGAGGAAATAGGAGATCTTTTCAGCCAGC
TAGCCAAGGATTACCCCGACTTGGCGCAGACCTATACAATAGGCAAATCC
CTGGAGGATCGACCCATCTACGCCCTAGCCTTAAGTGCACCTACCGGGGA
GTCCAAGAATGGAGATCTCCTAAGGCCAATGGTTAAACTGGTGGCCAACA
TACAAGGCGATGAAGCCGTGGGTCGTCAGATGGTTCTCTATATGGCCGAA
TACCTGGCCACCCACTACGATGGGGACCCGAAGGTCCAGGCGCTACTAAA
TCTCACCGAAATCCACTTCCTGCCCACCTGTAACCCCGATGGATTCGCCA
AAGCCAAGGAAGGCAACTGCGAGTCGCTGCCCAACTATGTGGGTCGTGGC
AATGCGGCCAACATCGATTTGAATCGCGATTTCCCCGATCGCCTGGAGCA
GAGCCATGTCCACCAGTTGCGCGCCCAGTCTCGTCAGCCGGAAACAGCAG
CCCTGGTAAATTGGATCGTTAGCAAACCGTTTGTGCTCTCCGCCAATTTC
CATGGCGGAGCTGTTGTGGCCAGCTATCCCTATGACAACTCCTTGGCTCA
CAATGAGTGCTGCGAGGAGAGTTTTGACTCCGGATTGATCGGGGTCTTCA
AGCAGC
FMO08794.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| svr-RH | 5842 | CG4122-RH | 495..1239 | 9..756 | 3665 | 99.6 | Plus |
| svr-RJ | 3092 | CG4122-RJ | 443..1187 | 9..756 | 3665 | 99.6 | Plus |
| svr-RE | 3144 | CG4122-RE | 495..1239 | 9..756 | 3665 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 496940..497390 | 9..459 | 2255 | 100 | Plus |
| X | 23542271 | X | 501983..502221 | 457..695 | 1195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:00:06 has no hits.
FMO08794.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:25 Download gff for
FMO08794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| svr-RH | 470..1214 | 9..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:17 Download gff for
FMO08794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| svr-RJ | 443..1187 | 9..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:54 Download gff for
FMO08794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| svr-RE | 495..1239 | 9..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:54 Download gff for
FMO08794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 496940..497389 | 9..458 | 100 | -> | Plus |
| X | 501985..502220 | 459..694 | 100 | -> | Plus |
| X | 502287..502345 | 695..756 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:17 Download gff for
FMO08794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 390973..391422 | 9..458 | 100 | -> | Plus |
| arm_X | 396018..396253 | 459..694 | 100 | -> | Plus |
| arm_X | 396320..396378 | 695..756 | 95 | | Plus |
