FMO08802.5prime Sequence
1046 bp (954 high quality bases) assembled on 2010-08-03
> FMO08802.5prime
CAGTCGACATGACGCAGACCAAGCAGCCAGCAGGGCGGTCGTCCACCTCG
GCCGGGGATTTTGTAGCCCCCATTAGCTCTACGAGTGCCTCCAAGTTCAC
GCCCTGCTCCGCCTCCGACCACAATGTCCTGCTGAACAACTTCCAGCTTA
AGAAGAAGAGCTACAGGGTCCTGCTTCACGGACAGCAGTTGGTTTGGGAG
CGTCTGCAGAAGATCAAGCAATCGCCCCAAGGAAACGAGGCCAAGGCACC
GTTGCCGCCGGACTCGCCAGCTCAACCAGGCGGAATCTGCTCTTATGGAC
CACAAAGCCACGCTCTCCACCTGGACGATGTGGTTAGCATAAGGAGCGGG
GACACCAAGGCGAGCTCCCTCAAACCGCCTTCGCCGCCAGGCTCGGAACG
CAGTTCCGGATGCAGTGGCGATGTTGCTCAAGGGAAGCCTACCAGTCAAT
ACCTGACCATCAACTATGCCATGAGGCTGAGCAAGTCCCAAACGGATTGC
AATCGGTGGGAGCTAAGGAGACTCACCTTCTTCAACTCGGATCCCTACAT
AGTGAGGCAGTGGGACCAGGAGCTGCAAATCCGTCTGCATAGCTCCTCCC
CCACCCGGATGCGAGTGCGCCGCCTTTTGGTCTTTATAAACCCCTATGGA
GGTCGCAAGGCGGGAGCTCAGACCTATGAGCGCCATGTGAGACCTATTTT
CCAGCTTGCCGGCGTAGACGCCACGTGTATCACCACTCAGAGGGCAAACC
AAGTGAAGGACATACTTCTGAGCCATGATCTGGGAGTATACGATGCGGTT
TGCTGTGTCGGATGCGATGGCACCGTAGCAGAGGTCATCAACGGACTGAT
ATTCCCGTCAATGCGAGAGTTGGGACTGGACGACAGCGGCCACATACATC
CCAAGACCGGCTCTGCCAGTGGGGTGTGATTCCGCTGGAGCACCGACACC
ATTGCGTATAGTATGCCCGGCACGAGGAATGTGAAGACAGCCGCTTATCC
TGTTGATCCTGGGCCCGCACCCGGGATATGAATGTGGGCATGGTAG
FMO08802.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cerk-RB | 2435 | CG16708-RB | 79..1119 | 1..1040 | 4685 | 97.2 | Plus |
| Cerk-RA | 2786 | CG16708-RA | 430..1470 | 1..1040 | 4685 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5360689..5361717 | 1027..1 | 4510 | 97.2 | Minus |
Blast to na_te.dros performed 2014-11-28 20:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\mini-me | 4622 | Dpse\mini-me DPSEMINIME 4622bp | 1589..1612 | 234..211 | 111 | 95.8 | Minus |
FMO08802.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:19 Download gff for
FMO08802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16708-RB | 79..1076 | 1..995 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:21 Download gff for
FMO08802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cerk-RA | 430..1427 | 1..995 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:14 Download gff for
FMO08802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cerk-RA | 430..1427 | 1..995 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:14 Download gff for
FMO08802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5360722..5361717 | 1..993 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:21 Download gff for
FMO08802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1186444..1187439 | 1..993 | 98 | | Minus |
