FMO08803.5prime Sequence
924 bp (847 high quality bases) assembled on 2010-08-03
> FMO08803.5prime
CAGTCGACATGGCCTCCGGCGATGGCGACACCATCAACACCATCGACATG
GACAGCTCCTCGGCGTCTCAGGCCAAACTGGCCGAGCCCAGCAATGCCTC
CACCGACCATGTGGGAAACTCATCGCCCGACCTGGGCAACCGACCGAACC
GAGCGTCCAGCAAGGCGGACAAGGAGCGCAAGATTGGCCACAGACGCGTC
GGCGAGGGCGGCGAGATTACGTACAAAAAGATCCAGACGTCGCAGATCAT
GGGCTCCATCCAACTGGGAATCCAGCACACTGTCGGCAGTCTGGCCTCGA
AGCCCAAGCGTGATCTACTTATGATGGACTTCTGGGAAATCGAGAGCATC
ACCTTTCCACCAGAGGGTTCTAGCCTTACACCTGCCCACCATTACAGCGA
GTTCAGATACAAGATCTATGCGCCCATAGCGTTTCGCTACTTTCGGGATC
TGTTTGGCATCCAACCAGATGATTTTATGATGTCCATGTGCACGTCCCCG
CTGCGGGAACTGTCCAATCCTGGTGCTTCCGGCTCTATATTCTACCTGAC
GACCGACGACGAGTTCATCATAAAGACGGTGCAACACAAGGAGGGTGAAT
TCTTACAGAAACTACTGCCTGGTTACTATATGAATCTAAATCAAATCCGC
GCACGCTATTGCCAAAGTTCTTCGGATTGTACTGCCTGCAGACGAGCAAT
GCCAATAATATTCGCCTGGTGGTCATGAACAATCTGCTGCCCTCGTCCGT
AAAGATGCACCTCAAGTACGACCTCTAGGGCTCCACGTTCAAGCGCAAGG
CCAACAAAGCGGTAGCGTGCCTAGAAGTCGCCCACGTACAAGGACCTCGA
CTCATGGAGCTGCATTCCAACCGGCTTATTCTTGGAGTCGAGGACTACGC
CGCGCTGATCAGACCATTCAGCGC
FMO08803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PIP5K59B-RI | 3556 | CG3682-RI | 261..1178 | 9..924 | 4285 | 98.2 | Plus |
| PIP5K59B-RH | 3481 | CG3682-RH | 261..1178 | 9..924 | 4285 | 98.2 | Plus |
| PIP5K59B-RF | 3544 | CG3682-RF | 261..1178 | 9..924 | 4285 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22876349..22876653 | 622..924 | 1070 | 94.5 | Plus |
| 2R | 25286936 | 2R | 22875895..22876092 | 282..479 | 990 | 100 | Plus |
| 2R | 25286936 | 2R | 20829465..20829938 | 676..204 | 790 | 78.3 | Minus |
| 2R | 25286936 | 2R | 22875567..22875718 | 132..283 | 760 | 100 | Plus |
| 2R | 25286936 | 2R | 22876144..22876287 | 479..622 | 720 | 100 | Plus |
| 2R | 25286936 | 2R | 22875029..22875116 | 9..96 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:41 has no hits.
FMO08803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:19 Download gff for
FMO08803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PIP5K59B-RE | 233..1157 | 1..924 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:03 Download gff for
FMO08803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PIP5K59B-RF | 254..1178 | 1..924 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:00 Download gff for
FMO08803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PIP5K59B-RF | 254..1178 | 1..924 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:00 Download gff for
FMO08803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22875022..22875116 | 1..96 | 95 | -> | Plus |
| 2R | 22875429..22875463 | 97..131 | 100 | -> | Plus |
| 2R | 22875567..22875716 | 132..281 | 100 | -> | Plus |
| 2R | 22875895..22876092 | 282..479 | 100 | -> | Plus |
| 2R | 22876145..22876287 | 480..622 | 100 | -> | Plus |
| 2R | 22876350..22876653 | 623..924 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:03 Download gff for
FMO08803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18762545..18762639 | 1..96 | 95 | -> | Plus |
| arm_2R | 18762952..18762986 | 97..131 | 100 | -> | Plus |
| arm_2R | 18763090..18763239 | 132..281 | 100 | -> | Plus |
| arm_2R | 18763418..18763615 | 282..479 | 100 | -> | Plus |
| arm_2R | 18763668..18763810 | 480..622 | 100 | -> | Plus |
| arm_2R | 18763873..18764176 | 623..924 | 94 | | Plus |
