FMO08804.5prime Sequence
1091 bp (806 high quality bases) assembled on 2010-08-03
> FMO08804.5prime
CAGTCGACATGAGCCCCTTCGGCTCCAAGAAAAACCGATCCCTGTCGGTG
CGGGTGAGCACCTTCGACTCGGAGCTGGAGTTCAAGCTGGAGCCGCGCGC
CTCCGGCCAGGATCTGTTCGACCTGGTGTGCCGCACCATCGGGCTGCGCG
AGTCTTGGTACTTTGGGCTGCAGTACGTCGACACCCGCAGCAACGTGTCC
TGGCTGAAAATGGAGAAGCGGGTGCGCGACCAGCGCGTTGAGCTGCACGC
TAGCAATAATGTGTATGTGTTTAGCTTCTACGCCAAGTTCTTTCCGGAGA
ACGTCAGCGAGGAGCTGATCCAGGAGATCACGCAGCACCTGTTCTTCCTG
CAGGTCAAGCAGAGCATCCTCTCCATGGACATCTACTGCCGCCCGGAGGC
GTCCGTGCTGCTGGCCTCCTACGCGGTGCACGTGCAATACGGTCCGTACG
ACTACGAGACCTACAAGGACGGTATGCTGGCCGGGGGTGAGCTTCTGCCC
AAGGGAGTGACCGATCAGTACCAGATGACGCCCGAAATGTGGGAGGAACG
GATCAAGACATGGTACATGGACCATGAGCCCATGACGCGCGACGAGGTGG
AGATGGAGTACCTGAAGATTGCTCAGGACCTGGACATGTACGGAGTAAAC
TACTTTCCTATTACGAATAAGAACAAAACCAAATTGTGGCTGGGCGTCAC
CCTCCGTGGGCCTAAACATCTACGATGAGCGCGATAAGCTAACGCCAAAG
ACAACGTTCCAGTGGAACGAGATACGGTACGTCAGCTTCGACGACAGAAG
TTTCACCTTTTGCCTGGTGGATGCCAAGGTTTCGAATTCCATCTTTTACT
CCGCTGGACCTCCCACATCAATAAAAATGATTTCTTGACCTGTGCAGGGG
CAATCACGATTCTATATATTCGCCGCCGCAAACCCGACACCATGAAATTC
CAGCATGATGAATGCCCAAGCCAATGTAGGAGAGTCAACGCCGCCCGAAT
CGAACGCAAAAGTTCATTCAGGAAAAGAAGCTGCCCCGAAATGGCGGAAT
CACTAGCGCCTACCGACTGGAAATAATGCATGTGAACCACC
FMO08804.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mer-RB | 3400 | CG14228-RB | 358..1388 | 9..1048 | 4585 | 96.9 | Plus |
| Mer-RA | 2503 | CG14228-RA | 358..1388 | 9..1048 | 4585 | 96.9 | Plus |
| Moe-RL | 2528 | CG10701-RL | 701..856 | 269..424 | 180 | 75.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19692301..19692957 | 665..9 | 3285 | 100 | Minus |
| X | 23542271 | X | 19692057..19692242 | 851..665 | 765 | 95.2 | Minus |
| X | 23542271 | X | 19691784..19691933 | 1034..882 | 340 | 89 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:53 has no hits.
FMO08804.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:18 Download gff for
FMO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mer-RA | 348..1390 | 1..1053 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:47 Download gff for
FMO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mer-RA | 350..1392 | 1..1053 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:50 Download gff for
FMO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mer-RA | 350..1392 | 1..1053 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:50 Download gff for
FMO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19692032..19692241 | 666..879 | 94 | <- | Minus |
| X | 19692301..19692961 | 1..665 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:47 Download gff for
FMO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19586065..19586274 | 666..879 | 94 | <- | Minus |
| arm_X | 19586334..19586994 | 1..665 | 99 | | Minus |
