FMO08807.5prime Sequence
1136 bp (1027 high quality bases) assembled on 2010-08-03
> FMO08807.5prime
CAGTCGACATGATTTTGTGTTTACATTTTGCCGGCAAATCGAAAATTGGA
TTTAGAGGCCCTAAATTAACCATGAATCTGTTCGAGGAGCTGGACACCTT
GGACCCCTCCTTCAAACTAGAGCCTCCCCGCATCGAGACGCCCACGGCGC
ACAAGATTACCGTGTTGATATTGCTCAAACAGTATGTGATTAACAAAAAA
AACTGTTTGGATACTGGGATATCCATGCGCACCCAGCGACGGCGCATGTT
CTATATGCTGGTATTCAAGCTCATCCAGGAGCAGGACAAGAGTTACAATG
AGCTACATAGTTTGTTGACCACGGGGAAATACAAACTGGATACTCTGATG
CTGGAATCCTTCGAAAAAGCCATGTCCGAGTTTTGTGCGGGCAGCATTGA
GGCCTTGTTTGACTTCTCGGAGATCCAGAACATCGACGAGATCCTAAACG
AAAACTACGGCATTAGCCAGTTCAGCATGGTGGGCGTTTATGTGCGCAGA
GTGGGCGTGGTGCTAGAGCGCCTCAGTTTCCCTGAGATGATGGATATGTA
CAAGAACGTATGCTCCTACTACGAGAGAGGAGTTCGAGCTGCTGCCTCTG
GTTCAAGAATGGCCGTAGCCGGAGGTATTCTGCACAGGGAGGAGACTCCT
CCTCCGAATCCCATAACAGAAAAGCCTGAGGATCCTAAACCTAAGAAGAA
AGTAGAGGCCGTAGCTCGTATTGCCCAAGAACGTAATCCCCTGAGCAAAT
GGGCGCCAAAACAGGCCAAGTTTTTCATCAACAAACAGTCGGAGCTGTTG
GAGAATAACGAACGTAAAGCTTTGCCTCCTTTGGAACTCCAGAAGACGTG
CAGAGATCATACACGACCTCCCACTAACACTACACCCTATTTCCTGGCTA
CATGAATCAGTTGAGAGTAAGGATTACTACATGCTCTTTCTGCCCTCCAC
AGAGCATTGGACAGAAGTCCCGTGCGCCTGATGAGCAAGAGAAGGCTACC
AGTAATTTTTGCGTCATTTGGCGGTACTAATGCACCTTTGGTCATCGGAT
GAGCGCTAGCCACGCTCAGGTAAGCATTATGCTGCCAGGGCACAGGCTAC
AAAGGACTTTACTTGCCACACTTTGACTGCTGTCAG
FMO08807.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ida-RA | 2408 | CG10850-RA | 14..1123 | 9..1103 | 4780 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3905602..3906468 | 192..1048 | 3485 | 96.7 | Plus |
| 3L | 28110227 | 3L | 3905357..3905539 | 9..191 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:45 has no hits.
FMO08807.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:16 Download gff for
FMO08807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ida-RA | 14..1123 | 9..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:45 Download gff for
FMO08807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ida-RA | 14..1123 | 9..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:46 Download gff for
FMO08807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ida-RA | 14..1123 | 9..1103 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:46 Download gff for
FMO08807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3905357..3905539 | 9..191 | 100 | -> | Plus |
| 3L | 3905602..3906528 | 192..1103 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:45 Download gff for
FMO08807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3905357..3905539 | 9..191 | 100 | -> | Plus |
| arm_3L | 3905602..3906528 | 192..1103 | 95 | | Plus |
