FMO08809.5prime Sequence
245 bp (245 high quality bases) assembled on 2010-08-03
> FMO08809.5prime
CAGTCGACATGTGGTTCGAAATCCTACCTGGTGCGGTGATCATCACCACG
CTCCTCTCGGTGCCCATATACGCCATGTACGGCCTGGACAAGCTGATGAT
CGGCAATGCTTTCCGGCGCAACATGGACGAGCGTTTCAGCCGAGTTATGT
ACCAGCGCGATTTCCGACTGACCGACAATCCCTACAAGATGAACGGTCTG
GATGCCATACCGGATGAGAAAACGAACGCAAGCTTTCTAGACCAT
FMO08809.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34439-RA | 384 | CG34439-RA | 83..301 | 9..227 | 1095 | 100 | Plus |
CG34439-RB | 728 | CG34439-RB | 83..273 | 9..199 | 955 | 100 | Plus |
TppII-RD | 4641 | CG3991-RD | 38..125 | 195..108 | 440 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13158748..13158847 | 9..108 | 500 | 100 | Plus |
2R | 25286936 | 2R | 13159017..13159104 | 108..195 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:43:43 has no hits.
FMO08809.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:14 Download gff for
FMO08809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34439-RA | 136..360 | 9..236 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:09 Download gff for
FMO08809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34439-RA | 83..307 | 9..236 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:10 Download gff for
FMO08809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34439-RA | 83..307 | 9..236 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:10 Download gff for
FMO08809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13158748..13158846 | 9..107 | 100 | -> | Plus |
2R | 13159017..13159103 | 108..194 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:09 Download gff for
FMO08809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9046253..9046351 | 9..107 | 100 | -> | Plus |
arm_2R | 9046522..9046608 | 108..194 | 100 | -> | Plus |