FMO08810.5prime Sequence
638 bp (638 high quality bases) assembled on 2010-08-03
> FMO08810.5prime
CAGTCGACATGGAACTCCTCAACGAATCTGCTCCGAATCCGCTTGCCAAG
ACGCCGAAAAGTGGCATGTCCACGGGCGGCAAGATCCTGATAGCAGCAAC
GGGCGGAGTAGGTATCGGTCTGTCGATTGTGTGCGCCTCCTTTGTGGCGC
CTGCATTCCGGAGGATTTGCTTGCCTTATGTGCCAGCGACGACCGAGCAA
ATACAGAACGTTCTCAGCTTCCTGCCCAAGAATTCGGCCGGAAAACTGCT
GGACATTGGATCCGGCGACGGACGGATTGTAGTGGCTGCGGCACAGCATT
GTGGTGCTCTAAAAGCAGATGGCGTGGAGCTAAACCCATGGCTGGTCTAC
TACTCGCGCCTGGCCGCGCTGCGTCACAGCGTTTCCAAACGGACGAGATT
TTTTCGGCGAGATCTCTGGAAGTTCGATATAAAGGACTACAACTTCGTGG
TCATTTTTGGGGTTGAGCATATGATGCAAGATCTAGAACACAAACTCATT
GCTGAGTGTCCGCACAACACCAAGATTATCGCCTGCCGCTTTCCACTACC
CAGCCTAGAGCACGTGAAGATTATAGAGGACGGAGTAAACACCGTCTGGT
TCTACGACCTGAACAAAAGCGCAAGCTTTCTAGACCAT
FMO08810.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-RB | 2819 | CG3337-RB | 52..663 | 9..620 | 3045 | 99.8 | Plus |
| CG3337-RA | 708 | CG3337-RA | 52..663 | 9..620 | 3045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21222860..21223195 | 620..285 | 1665 | 99.7 | Minus |
| 3R | 32079331 | 3R | 21223257..21223533 | 285..9 | 1385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:39:31 has no hits.
FMO08810.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:25 Download gff for
FMO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 1..615 | 9..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:36 Download gff for
FMO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 44..669 | 1..624 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:08 Download gff for
FMO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 44..669 | 1..624 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:08 Download gff for
FMO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21222854..21223194 | 286..624 | 99 | <- | Minus |
| 3R | 21223257..21223539 | 1..285 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:36 Download gff for
FMO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17048979..17049261 | 1..285 | 98 | | Minus |
| arm_3R | 17048576..17048916 | 286..624 | 99 | <- | Minus |
