FMO08814.5prime Sequence
1036 bp (847 high quality bases) assembled on 2010-08-03
> FMO08814.5prime
CAGTCGACATGGACACGGTAACCGAATCGGAGATGGCCATCGCCATGGCG
CTGTGTGGTGGCATTGGCATCATCCATCACAACTGCACGCCGGAATACCA
GGCGTTGGAGGTGCACAAGGTTAAGAAGTACAAGCACGGCTTCATGCGCG
ACCCCTCGGTGATGTCGCCCACGAATACGGTGGGGGATGTGTTGGAGGCG
CGGCGGAAGAACGGATTCACCGGCTATCCGGTCACCGAGAACGGCAAACT
TGGCGGCAAGCTGCTGGGCATGGTCACGTCGCGAGACATTGACTTCCGCG
AGAACCAGCCGGAGGTCCTGCTGGCCGACATCATGACCACCGAACTGGTC
ACCGCTCCCAATGGCATCAATCTGCCCACGGCAAACGCTATTCTCGAGAA
GAGCAAGAAGGGCAAACTGCCGATTGTGAATCAGGCCGGCGAACTGGTGG
CCATGATTGCCCGCACGGATTTGAAGAAGGCCCGCTCCTACCCGAATGCC
TCCAAGGACTCCAATAAGCAGCTCCTCGTCGGCGCTGCCATCGGAACGCG
ATCGGAGGACAAGGCGCGCCTGGCTCTGCTGGTGGCCAACGGCGTGGACG
TTATCATCCTTGATTCATCGCAGGGCAACTCCGTCTACCAGGTGGAGATG
ATCAAGTACATTAAGGAGACCTATCCCGAACTACAGGTCATTGGTGGCAA
TGTGGTAACACGTGCCCAGGCCAAAAATCTCATTGATGCCGGCGTCGATG
GACTGCGTGTGGGTATGGGTTCCGGTTCCATCTGCATCACCCAGGAGGTG
ATGGCCTGCGGATGTCCTCAGGCCACTGCTGTCTACCAAGTGTCCACGTA
CGCTCGCCAATTCGGAGTGCCAGTGATCGCGGAAGGGAGCTTCCAGTCCA
TGGGACACTTGTGAAAGCTATTGTCATTGGAGCATGCTGATAGATGGTCT
CCCTGCTGGCGGGACACTGAAGGACCCGGCATTATATATCTCTAACGTAG
GTGCGCCCTTAAAAGACCGCGGCGGGTCTTCCCCGG
FMO08814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ras-RD | 2810 | CG1799-RD | 575..1534 | 8..963 | 4475 | 98.1 | Plus |
| ras-RE | 2415 | CG1799-RE | 471..1430 | 8..963 | 4475 | 98.1 | Plus |
| ras-RA | 2519 | CG1799-RA | 575..1534 | 8..963 | 4475 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10746420..10747072 | 50..702 | 3265 | 100 | Plus |
| X | 23542271 | X | 10747485..10747707 | 702..923 | 945 | 96 | Plus |
| X | 23542271 | X | 10746184..10746226 | 8..50 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:36:45 has no hits.
FMO08814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:12 Download gff for
FMO08814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ras-RB | 543..1427 | 1..883 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:46 Download gff for
FMO08814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ras-RC | 368..1252 | 1..883 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:26 Download gff for
FMO08814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ras-RA | 566..1450 | 1..883 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:26 Download gff for
FMO08814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10746175..10746226 | 1..50 | 92 | -> | Plus |
| X | 10746421..10747072 | 51..702 | 100 | -> | Plus |
| X | 10747486..10747666 | 703..883 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:46 Download gff for
FMO08814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10640208..10640259 | 1..50 | 92 | -> | Plus |
| arm_X | 10640454..10641105 | 51..702 | 100 | -> | Plus |
| arm_X | 10641519..10641699 | 703..883 | 98 | == | Plus |
