FMO08815.5prime Sequence
555 bp (432 high quality bases) assembled on 2010-08-03
> FMO08815.5prime
CAGTCGACATGGCCCTGTATCCATCCTCGTCGCGACCGCGGACGCTCATG
GAGCAGCTGCTGGCACGCAAGATTGAGGCTGCTGCCGCAGCGGGCGGCGC
TCCCTCCGCCGCTACCGCAACTCCTACCGCTTCCGGCTCGGCCACGCCCA
CGCCCTCGCCAACATCACCCAATCCGCCAGCGGTCGGCGGCATGGGACTG
CCCATGCCACTGACCCTGGGCCTGGGCTTGGGCCTGGGCATGGGCATGGG
CGTGGTTAGCCGCCTGCGACGCACCGACTCCTTGGACTCCACCAGCAGCC
TGGGTTCGCTGGCCTTCGGCGAGGATGTGTGCCGCTGCGACGACTGCCTT
CTGGGCATCGTCGATCTCTACGTGATTAGTGCCGCCGAGGCGGCGAAAAA
GAAGAGCTCCGGCTGGCGAAAGATTCGCAACATCTTTCATTGGACGCCCT
TCTTTCTGACGTACAAGAAGCAGCGCTATCCATGGGTTCAACTGGCCGGA
CACCAGGGCAACTTCAAGGCAGGTCCCGAACCGGGCACCGTGCTCAAGAA
GCTCT
FMO08815.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K2-RH | 2355 | CG45017-RH | 411..960 | 6..555 | 2690 | 99.3 | Plus |
| IP3K2-RC | 2554 | CG45017-RC | 610..1159 | 6..555 | 2690 | 99.3 | Plus |
| IP3K2-RD | 2222 | CG45017-RD | 512..1061 | 6..555 | 2690 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13318649..13319047 | 6..404 | 1980 | 99.7 | Plus |
| X | 23542271 | X | 13327346..13327498 | 403..555 | 720 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:12:56 has no hits.
FMO08815.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:11 Download gff for
FMO08815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RC | 1..547 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:45 Download gff for
FMO08815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RD | 485..1040 | 1..555 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:52 Download gff for
FMO08815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RD | 506..1061 | 1..555 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:52 Download gff for
FMO08815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13318643..13319047 | 1..404 | 99 | -> | Plus |
| X | 13327348..13327498 | 405..555 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:45 Download gff for
FMO08815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13221381..13221531 | 405..555 | 98 | | Plus |
| arm_X | 13212676..13213080 | 1..404 | 99 | -> | Plus |
