FMO08826.5prime Sequence
839 bp (451 high quality bases) assembled on 2010-08-03
> FMO08826.5prime
CAGTCGACATGAACCGCTCCGGCAATTCCCACACCACACAGAAACTCGTC
AACCTGGACGATATCTGGAGCGAATTGGTCGAGGGCATTATGCAGGTGTT
TGAGCACGAAAAGTCCCTCACCCGCAGCCAGTACATGCGTTTCTACACTC
ACGTCTATGACTACTGCACCAGCGTGAGCGCGGCTCCAAGCGGACGGAGC
AGCGGAAAGACAGGCGGAGCGCAGCTGGTGGGCAAGAAGCTGTACGACCG
GCTGGAACAATTTCTCAAGTCATACCTGAGCGAGCTGCTCACCAAGTTCA
AGGCCATCAGCGGCGAGGAGGTACTCCTGTCGCGCTACACCAAACAGTGG
AAGTCGTATCAGTTCTCCAGTACCGTTCTGGACGGCATCTGCAACTACCT
GAATCGGAACTGGGTGAAGCGCGAGTGCGAGGATGGGCATAAGGGTATCT
ACAAGTTCTACCGACTGGCCCTCGTCGCCTGGAAGGGACATTTGTTCCAA
GTGCTAAATGAGCCGGTCACCAAGGCAGTGCTCAAGTCCATTGAGGAGGA
GCGTCAAGGCAAGCTCATTAACCGGTCGCTGGTCCGCGACGTTATCCAGT
GCTACGTGGAGCTCAGCTTTAACGAGGAGGATACCGATGCCGAGCAGCAG
AAGTTATCCTCTATAGCAAAACTTTTAAACAAGTTCATCCGTCACTCATC
ACCTTCTACGAGAAGGAGTCGGACGCCTTTTTGTCCCCAACCTGGTCCCG
AGTATCTGAACCCTTCGAAAACCGGCTGGAGGAGGAGTCTGTGCGAGCCG
CGGTTTTTTTTAAAGAACTGTCTTTCTTATCTGCCCAGA
FMO08826.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cul1-RD | 3184 | CG1877-RD | 367..1201 | 9..834 | 3515 | 95.4 | Plus |
| Cul1-RA | 3207 | CG1877-RA | 390..1224 | 9..834 | 3515 | 95.4 | Plus |
| Cul1-RB | 3886 | CG1877-RB | 388..1222 | 9..834 | 3515 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7917964..7918749 | 9..787 | 3295 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:28:19 has no hits.
FMO08826.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:04 Download gff for
FMO08826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lin19-RA | 382..1183 | 1..795 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:03 Download gff for
FMO08826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lin19-RB | 380..1181 | 1..795 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:13 Download gff for
FMO08826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cul1-RB | 380..1181 | 1..795 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:13 Download gff for
FMO08826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7917956..7918783 | 1..818 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:03 Download gff for
FMO08826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3805461..3806288 | 1..818 | 95 | -> | Plus |
