FMO08829.5prime Sequence
998 bp (892 high quality bases) assembled on 2010-08-03
> FMO08829.5prime
CAGTCGACATGGATGTGGCAGATGCTCAGGTTGGCCAGCTGCGCGTAAAA
GACGAGGTGGGCATTCGGGCCCAGAAGTTGTTTCAGGATTTCCTCGAGGA
ATTCAAGGAGGATGGCGAGATCAAGTACACGCGCCCAGCCGCCAGCTTGG
AATCCCCGGATCGCTGCACCCTGGAGGTCAGCTTCGAGGATGTGGAGAAA
TACGATCAGAATCTGGCCACCGCCATTATCGAGGAGTACTACCACATCTA
TCCGTTCCTTTGCCAATCCGTTTCGAACTACGTTAAGGACCGGATTGGAC
TGAAGACCCAGAAGGATTGCTATGTGGCCTTCACGGAGGTGCCGACGCGT
CACAAGGTTCGCGATCTGACCACCTCCAAAATCGGCACCCTCATCCGCAT
CTCCGGCCAGGTGGTGCGCACCCATCCCGTACATCCGGAGCTTGTTTCCG
GCGTCTTCATGTGCCTCGATTGCCAGACGGAAATTCGGAACGTAGAGCAG
CAGTTCAAGTTCACCAATCCCACCATTTGCCGCAATCCCGTGTGCTCCAA
TCGCAAGCGTTTCATGCTGGATGTGGAGAAGAGTCTGTTCTTGGACTTTC
AAAAGATTCGCATCCAGGAGACGCAAGCCGAGCTGCCGCGTGGCTGTATT
CCCCGCGCGGTGGAGATTATCCTGCGCTCGGAGCTGGTGGAGACCGTTCA
GGCTGGCGATCGCTATGATTTCACGGGGCACTCTGATTGTGGTGCCCGAT
GTGAGTGTCCTGGCCGGAGTGGGCACACGGGCGGAGAACAGTTCATGCCT
CAAGCCCGGCGAGGGCATTGGATGGCGTCACTGGCCTAAAGGCACTTGGG
CTTGCAAGAGCTCAACTATCGATGGGCTTCCCTGCCTGCAGTGTTAAGCA
CGACAGCACCTATTGCGGAACTGATCTGCCATGTCGAGGTGACAGCGAGA
ATTGAAAATCCAATGACAGATGCCGAGTTGACAAATCTATTAAATGTC
FMO08829.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm6-RA | 2790 | CG4039-RA | 120..1117 | 9..998 | 4385 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6674506..6675390 | 9..895 | 4150 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:34 has no hits.
FMO08829.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:01 Download gff for
FMO08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm6-RA | 118..1115 | 9..998 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:00 Download gff for
FMO08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm6-RA | 118..1115 | 9..998 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:56 Download gff for
FMO08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm6-RA | 120..1117 | 9..998 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:56 Download gff for
FMO08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6674506..6675503 | 9..998 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:00 Download gff for
FMO08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6568539..6569536 | 9..998 | 96 | | Plus |
