FMO08840.5prime Sequence
1136 bp (947 high quality bases) assembled on 2010-08-03
> FMO08840.5prime
CAGTCGACATGAACATGATGGACAACCGGGCGTTGGCCTACGTGGCCCAC
CAGCCCAAGTATGAGACACCGCCGGAAGAAGCGGAGCCGCCCTGCATGCG
CTTTTCGGTTAACCTGTGGAAAAACGAGATGCTGAACTGGGTGGACCTAA
TCTGCCTGTTGCCCAATGGATTCCTGCTGGAGCTCAGGGTCAATCCGGCC
AACACCATCCAGGTAATCAAGGTGGAGATGGTCAACCAGGCCAAACAGAT
GCCACTGGGCTATGTGATCAAAGAGGCCTGCGAGTACCAGGTGTACGGCA
TCTCGACCTTCAACATCGAACCTTACACCGACGAAACGAAGCGACTCAGT
GAGGTCCAGCCGTACTTCGGCATCCTCAGCCTCGGCGAGCGCACCGACAC
AACGAGCTTTAGCAGCGACTACGAGCTGACCAAGATGGTTAACGGAATGA
TCGGCACCACCTTCGATCATAATCGAACGCACGGCTCGCCCGAGATTGAC
GACTTCCGGCTGTATATGACCCAAACTTGCGACAACATCGAACTGGAGCG
CTCCGCCTACACCTGGCAGCAGAGACTGCTCTACGAGCATCCTCTGCGAC
TGGCGAACTCGACTAAAATGCCCGAGCTGATACGGGAGCGGCATCCGACC
AGAACCTTTCTCATCGTCGTAAAGAACGAGAACGACCAGAGCACGTTTAC
GTTGTCGGTGAACGAGCAGGACACTCCCTTCTCGCTCACGGAAAGCACGC
TGCAGAAGATGAATCGGTCGCAGATGAAAATGAACGACCGGACCTCCGAC
TACATACTCAAAGTGAGCGGTCGCGACGAGTACCTGCTTGGCGACTATCC
CCTGATTCAGTTCCTGTACATCCAAGAGATGCTCTCGGACTCGGCGGTTC
CAATGTGGTGTTGCATCAGTTTACCGCCTAGAGTCTACATCAACCACCAC
AACGAGGCAGGCCATGGTAACCAACGACCGCTGGCCGAAAAACCGGAACG
TCCACCCTCCTCAGTCGCATCTCTTTGCTGGTGGAACTGGGGCAACTACT
TTCATTTGACGCTGCCAAGCATTTCAAGTGAACTTTGACATAACGCTGGC
CCTCAAGGGTGCTGGCAGTGGGCTATTCAGGTAATA
FMO08840.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K92E-RC | 4839 | CG4141-RC | 797..1899 | 8..1108 | 4985 | 97.4 | Plus |
| Pi3K92E-RB | 4347 | CG4141-RB | 305..1407 | 8..1108 | 4985 | 97.4 | Plus |
| Pi3K92E-RA | 4420 | CG4141-RA | 378..1480 | 8..1108 | 4985 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20632421..20633523 | 1108..8 | 4740 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:34 has no hits.
FMO08840.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:21:52 Download gff for
FMO08840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RB | 273..1249 | 1..974 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:03 Download gff for
FMO08840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RA | 370..1346 | 1..974 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:05 Download gff for
FMO08840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RA | 370..1346 | 1..974 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:05 Download gff for
FMO08840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20632555..20633526 | 1..974 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:03 Download gff for
FMO08840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16458277..16459248 | 1..974 | 99 | | Minus |
