FMO08851.5prime Sequence
801 bp (661 high quality bases) assembled on 2010-08-03
> FMO08851.5prime
CAGTCGACATGAAGATATGGAGGCTGTTCTCCCAGCTGATCGTTTCGCTG
GCATGTGTTTTTGGCCAGCAGCCGGATATGGATGTTGTGGGATCTTGCTC
TAGATACAAGAAGAGCGTTTTCGAGGAAAGAATCGAGTTCGGTTTCCTGT
TGCCCGGAGCTTCGATTGAGAGTCGGATCATAGACAACTGCAGGAGCTAC
ACGCCGCTCATCGTCGGTGGTCATCCGGCCCAGCCCAGGGAATTTCCGCA
TATGGCCCGCTTGGGGCGTCGCCCAGATCCGAGCAGCCGTGCCGACTGGT
TTTGTGGTGGCGTTCTGATCAGCGAGCGGTTCGTCTTAACCGCAGCTCAC
TGCCTGGAATCGGAAAGGGGAGAGGTGAATGTTGTGCGATTGGGCGAACT
CGACTTCGATTCCTTGGATGAGGATGCGGCGCCCTTAGACTATATGGTTG
CAGGGTATATAGCCCATCCGGGCTACGAAGATTCGCAGTTCTACCATGAT
ATAGGTCTTGTCAAACTGACGGAGGCCGTGGTCTTTGACCTATATAAGCA
TCCAGCCTGTCTGCCGTTCCAGGATGAACGCTCTTCCGACTCCTTCATAG
CCGTTGGGTGGGGAAGCACTGGCCTGGCGCTGAAACCATCCCGCCCAGCT
GCTGAAGGTGAAGATGCAGCGCTACGGTAATTGGGTGTGCAAGAAACTGC
TTACCCGGCAGTTGGAGGAGTTCCCTCGAGGATTCGATGGAAACATCAGC
TCTGTGTGGGTTTGGAGATGGCCCAGATACTGTAACGGCTACTCATGAGG
A
FMO08851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11843-RB | 1223 | CG11843-RB | 202..996 | 9..801 | 3685 | 97.9 | Plus |
| CG11843-RA | 1048 | CG11843-RA | 27..821 | 9..801 | 3685 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29055099..29055418 | 366..686 | 1465 | 97.8 | Plus |
| 3R | 32079331 | 3R | 29054773..29055047 | 94..368 | 1375 | 100 | Plus |
| 3R | 32079331 | 3R | 29054548..29054632 | 9..93 | 425 | 100 | Plus |
| 3R | 32079331 | 3R | 29055490..29055583 | 684..776 | 360 | 94.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:29 has no hits.
FMO08851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:21:40 Download gff for
FMO08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 25..818 | 9..800 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:40 Download gff for
FMO08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..820 | 9..800 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:38 Download gff for
FMO08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..820 | 9..800 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:38 Download gff for
FMO08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29055491..29055609 | 685..800 | 91 | | Plus |
| 3R | 29055101..29055416 | 368..684 | 97 | -> | Plus |
| 3R | 29054548..29054632 | 9..93 | 100 | -> | Plus |
| 3R | 29054773..29055046 | 94..367 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:40 Download gff for
FMO08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24880270..24880354 | 9..93 | 100 | -> | Plus |
| arm_3R | 24880495..24880768 | 94..367 | 100 | -> | Plus |
| arm_3R | 24880823..24881138 | 368..684 | 97 | -> | Plus |
| arm_3R | 24881213..24881331 | 685..800 | 91 | | Plus |
