FMO08876.5prime Sequence
293 bp (293 high quality bases) assembled on 2010-08-03
> FMO08876.5prime
CAGTCGACATGACCAAGGGAACCACTAGTTTTGGAAAGCGCCACAACAAG
ACGCACACCATCTGTCGCCGGTGCGGCAACTCGTCGTACCATCTGCAGAA
ATCGAAGTGCTCCCAGTGCGGCTATCCTGCGGCCAAGACCCGAAGCTTCA
ACTGGTCCCGAAAGGCCAAGGGTCGCAAGGCGCAGGGAACGGGAAGGATG
CGGTACCTCAAGAATCTGCGCCGTCGTTTTCGCAACGGATTGCGTGAAGG
AGGTGCCGCTAAGAAAAAAACCAACGCAAGCTTTCTAGACCAT
FMO08876.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL37b-RA | 422 | CG9873-RA | 106..372 | 9..275 | 1335 | 100 | Plus |
| RpL37a-RB | 565 | CG9091-RB | 114..346 | 9..241 | 265 | 74.8 | Plus |
| RpL37a-RA | 1296 | CG9091-RA | 114..346 | 9..241 | 265 | 74.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23100107..23100373 | 275..9 | 1335 | 100 | Minus |
| X | 23542271 | X | 15138989..15139115 | 137..11 | 215 | 78 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:42 has no hits.
FMO08876.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:21:19 Download gff for
FMO08876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37b-RA | 1..270 | 9..279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:35 Download gff for
FMO08876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37b-RA | 100..376 | 2..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:42 Download gff for
FMO08876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37b-RA | 100..376 | 2..280 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:42 Download gff for
FMO08876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23100103..23100379 | 2..280 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:35 Download gff for
FMO08876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18987626..18987902 | 2..280 | 97 | | Minus |
