FMO08883.5prime Sequence
970 bp (903 high quality bases) assembled on 2010-08-03
> FMO08883.5prime
CAGTCGACATGTGTGACGGCGATGTGGCAATTGCGGAGCTGGAATCCCGT
CTGGATGAGGTCAGTCTGGAGGACATAGGTGCCAGACATCGTCGCGAGCG
CAAGGATTTGCAGGCCAAGCTGCAGGCCATGAAGAAGAATGCGCCGAAAA
ATAATAAAAACAAGCGGAAGGAGTTCCTGGAGGAGATGGCTCGCCTGGAG
GGAGAGCTGGAGCAGCGCCACAAGGCGGAACTGAAGGCAGCGGAAGCCAT
GGAGGCACCGGTGTTGGTGGAACCGGTCGTCAAAGAGCCAGCGGAAAAGC
CAGAAACTGAAGTGACAGACGATGATGGAATCGAGGAAAAAGAGGAACAG
CTGGCGCCCAATCAGCGTGTTTCCAAGGCACAGAAACGCCGGGACAAGAA
GGCAAAGGAGGCACGTGCACGAGAGGCAGAGATCAAGACGGAGCTGCAAA
ATGCTGCCAATCAGCCAACGCCCAAGTTAATCGAACTGCAGCAGATTACA
GCAAAGCTATCCCAACGCCAATTATCCCTTCACAATATACCCTCCGATGG
CGACTGCTTATATCAGTCCATCAGACACCAACTTATCGTAAATGCTCTTC
CAGGTCACAGTGTTCAGGAGTTGCGGGAGGAAACTGCCAATTATGTGCGT
GCTCACAAGGACTCGCTTATCTCATACATGATCCACCCGGAAACAGGAGA
CATTCTGAACGACCAACAATTCGAACAATACTGCCACGACATAGCAAAAA
CTCACGCTTGGGGTGGCCACATAGAACTGAATGCCATCTCATCGCTACTC
CGGGTGCCCATTGAATTTATCCAAGCGGAATGAGCACCCGACGCTCCTGG
GGCAAGAGGCATTTCGGTGGATCCACCGCTTGATCATCTGCTACCACCGC
CACATTATCCAAATTGGGTGGCCCACTACAATTCCACCTGTGCCAGCAGC
CGCATGCTTTCTAGAACAAT
FMO08883.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7857-RA | 1234 | CG7857-RA | 80..1017 | 7..951 | 4445 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15504217..15504815 | 605..7 | 2995 | 100 | Minus |
| 3L | 28110227 | 3L | 15503817..15504159 | 951..602 | 1295 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:45 has no hits.
FMO08883.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:21:25 Download gff for
FMO08883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7857-RA | 80..1017 | 7..951 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:37 Download gff for
FMO08883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7857-RA | 80..1017 | 7..951 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:43 Download gff for
FMO08883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7857-RA | 80..1017 | 7..951 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:43 Download gff for
FMO08883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15503818..15504157 | 604..950 | 95 | <- | Minus |
| 3L | 15504219..15504815 | 7..603 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:37 Download gff for
FMO08883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15496918..15497257 | 604..950 | 95 | <- | Minus |
| arm_3L | 15497319..15497915 | 7..603 | 100 | | Minus |
