FMO08893.5prime Sequence
792 bp (792 high quality bases) assembled on 2010-08-03
> FMO08893.5prime
CAGTCGACATGCGCTGCGCTGTAAAAAATTGCGGAAATAATAATCGTATT
GCCAATAGAACGAAATGGAGATACTTTCACTTCCCCAAAGAAAAGCCAAA
CCTCCAAAGGTGGATAGATTTTTGCCAGCGAGATAATATAAACCCCACAA
CTGCCTGTATTTGCAATGAGCACTTTGCACCCAATGACTTTGAGCGAAAT
ATGCAATACGAATTGGGCTTTAGCCGCAAAAATCCAACAAAACTAAAGCC
CGGCTCATTTCCGAGTGTGAATGGACCCCAAAAGTTGGCGAAGGAACTGC
GAGGAAGTATCAAAAGGGGCTCCAAAAGTGTTCCCTTAGCTGGGTCTACG
AAAATGTCCAATATAGGCTTTGATCCACACCATGCAGGAACGCAATCCTC
GGAAGGCCACGAAACCATAGAAATCCAACTCTGTGGTTTTAATACAGATA
TTGAGGGCTTCGAAGAAGCCGAAGATGACGACTGTCCTTCAGGTCCCCGG
CTCGTGGAAGTAGAAATATTGGATCCTCTTAACCCGCAGTCAAATGCCAA
GGATCATGTGGAGATAATCGATTCGGAAGGCGACAGTTATGTGAAGCACT
TGGAGCTCGAAATATGCTCCTTAAAGCGTGAGGTATTTTTTCCTCAAAGA
CGAATACCAGAAGATAAAGGCTGAAATGCGTAATCTCAAGGACACAATAA
AAAGATCAGAGGAAGAACTCGCAGAAAAACAACTCCAAGGTGTTGTTAAA
AGCAGAAAAAGGAAATCTCAGTTTGCAAGCTTTCTAGACCAT
FMO08893.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14135-RB | 937 | CG14135-RB | 48..812 | 9..774 | 3805 | 99.9 | Plus |
| CG14135-RC | 1064 | CG14135-RC | 124..873 | 9..759 | 3730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11691895..11692359 | 149..613 | 2310 | 99.8 | Plus |
| 3L | 28110227 | 3L | 11691694..11691838 | 9..153 | 725 | 100 | Plus |
| 3L | 28110227 | 3L | 11692422..11692566 | 614..759 | 680 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:42 has no hits.
FMO08893.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:21:09 Download gff for
FMO08893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14135-RB | 48..816 | 9..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:06 Download gff for
FMO08893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14135-RB | 48..816 | 9..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:46 Download gff for
FMO08893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14135-RB | 48..816 | 9..778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:46 Download gff for
FMO08893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11691694..11691838 | 9..153 | 100 | -> | Plus |
| 3L | 11691900..11692359 | 154..613 | 100 | -> | Plus |
| 3L | 11692422..11692566 | 614..759 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:06 Download gff for
FMO08893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11684794..11684938 | 9..153 | 100 | -> | Plus |
| arm_3L | 11685000..11685459 | 154..613 | 100 | -> | Plus |
| arm_3L | 11685522..11685666 | 614..759 | 99 | -> | Plus |
