Clone FMO08896 Report

Search the DGRC for FMO08896

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:88
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptAcp24A4-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08896.5prime Sequence

260 bp (260 high quality bases) assembled on 2010-08-03

> FMO08896.5prime
CAGTCGACATGAAGCTGCTGATTCTTCTTTTTGTTTTCATCGCTCTTGCA
AGCAATTCTTTGGCTCTGAAAAATGAAATCTGTGGATTACCCGCTGCCGC
TAATGGTAATTGCTTGGCATTGTTTTCTCGCTGGTCTTATGATGCTCAAT
ATAACGTATGCTTTAATTTTATCTACGGCGGATGTCAGGGCAACGAAAAT
TCATTTGAATCCCAGGAAGAGTGTATAAATAAGTGCGTGGAGGCAAGCTT
TCTAGACCAT

FMO08896.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:59
Subject Length Description Subject Range Query Range Score Percent Strand
Acp24A4-RC 653 CG31779-RC 41..279 4..242 1180 99.6 Plus
Acp24A4-RB 342 CG31779-RB 25..263 4..242 1180 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3693558..3693725 242..75 840 100 Minus
2L 23513712 2L 3693794..3693865 75..4 345 98.6 Minus
2L 23513712 2L 3694108..3694275 242..75 285 78 Minus
Blast to na_te.dros performed on 2014-11-28 19:42:57 has no hits.

FMO08896.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:21:13 Download gff for FMO08896.5prime
Subject Subject Range Query Range Percent Splice Strand
Acp24A4-RB 22..266 1..246 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:44 Download gff for FMO08896.5prime
Subject Subject Range Query Range Percent Splice Strand
Acp24A4-RB 22..266 1..246 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:49 Download gff for FMO08896.5prime
Subject Subject Range Query Range Percent Splice Strand
Acp24A4-RB 22..266 1..246 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:49 Download gff for FMO08896.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3693559..3693724 76..241 100 <- Minus
2L 3693794..3693868 1..75 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:44 Download gff for FMO08896.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3693559..3693724 76..241 100 <- Minus
arm_2L 3693794..3693868 1..75 96   Minus