Clone FMO08908 Report

Search the DGRC for FMO08908

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:89
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG40053-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08908.5prime Sequence

251 bp (251 high quality bases) assembled on 2010-08-03

> FMO08908.5prime
CAGTCGACATGGCAGGGATCAAAGCAGTGGTCGCCAACATCAGGAGCAAG
GAAGACACCATAAAGCTGTTATTGAGGAAAACGAAACACGACAGTCGGCA
TCAAACCAGTGGCGAAAATTGTGATGAGGGTGTGCGATATCAGCGGTCGA
TTGATAGGAAATGGATTTTCAACACGCGGTCACAATGTGGGGAGCAATCG
GCAAAACATGGGAACACCTATATGAACAGGAAGGCAAGCTTTCTAGACCA
T

FMO08908.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:12:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 24010385..24010609 233..9 1110 99.6 Minus
Blast to na_te.dros performed on 2014-11-28 22:12:16 has no hits.

FMO08908.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:53 Download gff for FMO08908.5prime
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 676..913 1..237 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:00 Download gff for FMO08908.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 24010379..24010616 1..237 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:00 Download gff for FMO08908.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 24010379..24010616 1..237 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:53 Download gff for FMO08908.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 24003479..24003716 1..237 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:53 Download gff for FMO08908.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 24003479..24003716 1..237 97   Minus