FMO08910.5prime Sequence
1154 bp (996 high quality bases) assembled on 2010-08-03
> FMO08910.5prime
CAGTCGCATGATGAAGTTCAGTTGTGTCCGCGTGGCGATGAGATGCAGTG
GAGCCCACTCCATCCTCGAGAGAAATATGCTCTGCAGGATAATAGGGCGC
CACAAATGTAGCTGTTTGACCCTGGAGAACACGTTCAAGTGCTACGACCT
GGAGAATGGACCCACAATGGACGTGGAGCTGTCCAGGGAGGACGCCCTGA
CGATGTACACGCAGATGCTGGAACTGCGCCGGTTCGAGACGGTGGCGGGC
AACTACTATAAGGAGCGAAAAATCCGCGGCTTCTGCCATTTATATAACGG
ACAGGAGGCCGTCGCTGTTGGCATGAAGCAGCGTTTGAGGTCCTGCGACT
CGGTCATAACGGCATACCGTTGTCATGCCTGGACCTATTTAATGGGTGTT
TCCCTTTACGAAATAATGGCGGAATTGTTCGGAGTTCGAACTGGATGCAG
CCGGGGCAAAGGTGGCTCTATGCACATGTACAGCGATAAGTTTTATGGCG
GCAATGGTATCGTTGGTGCCCAAGTTCCGCTCGGCGCGGGAATTGGCCTC
GCGCACAGTTATCGCAAGGACAACGGCGTGTCGGTGGTCCTTTATGGTGA
TGGTGCCGCCAATCAGGGCCAGATCTTTGAGTCCTTCAACATGGCCAAGC
TGTGGTGCTTGCCCTGCATATTCGTTTGCGAGAACAATCACTACGGCATG
GGCACCCACGTTAAGCGGGCCTCTGCCATGACGGAGTTCTACATGCGTGG
CCAATATATCCCTGGTCTTTGGGTCGATGGCAATCAGGTGCTGGCCGTGC
GTAGCGCCTCCCAATTCGCCGTGGACCATGCCCTCAAGCACGGACCCATT
GTGCTCGAGATGAGCACCTATCGCTATGTGGGTCACTCCATGTCCGATCC
GGGTACATCGTATCGCTCGAGAGAAGAAGTCCAATCGACGAGGGAGAAAC
GCGATCCGATTACAGTTTCCGCAGTCAGATCATCGCCTTTGTGTCTCGGC
GAGAGAGGAGCTGAAGGCCCTGGATGAATAAGATCTTGGGATGCAGGTTG
ATAGCATTTGCAAGAAGCCACACTCGACTAGGGAAGTTACACTGATGAGC
TGCCACCCGAAATCCTATGCAAGAATGTGGGAATGTAGATCGCGTCTGGG
TTCT
FMO08910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7024-RA | 1878 | CG7024-RA | 256..1378 | 8..1130 | 5090 | 97.6 | Plus |
| l(1)G0334-RB | 1992 | CG7010-RB | 889..1354 | 451..916 | 305 | 72.6 | Plus |
| l(1)G0334-RD | 1667 | CG7010-RD | 564..1029 | 451..916 | 305 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4706005..4706939 | 131..1066 | 4280 | 98.3 | Plus |
| X | 23542271 | X | 4705564..4705686 | 8..130 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:12:28 has no hits.
FMO08910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:58 Download gff for
FMO08910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 256..1334 | 8..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:43 Download gff for
FMO08910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 256..1334 | 8..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:04 Download gff for
FMO08910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 256..1334 | 8..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:04 Download gff for
FMO08910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4705564..4705686 | 8..130 | 100 | -> | Plus |
| X | 4706005..4706939 | 131..1066 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:43 Download gff for
FMO08910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4599597..4599719 | 8..130 | 100 | -> | Plus |
| arm_X | 4600038..4600972 | 131..1066 | 98 | == | Plus |
