FMO08911.5prime Sequence
1109 bp (981 high quality bases) assembled on 2010-08-03
> FMO08911.5prime
CAATCGACATGTTTATTTGGCATTACTTGACCCTCTTGTGCCTTGGGTTC
GCCCTCATCGATGCGAAATCCATCAAGAAGTCGCAGGCCAATCTGTTGGA
GCCAACTCTTGATCCTGATGAGAAGCTAGGGAAGATTGGGAAGTCCCCAC
CCGACATTTCCAATGATGTGCAACGTGTGCAGGTTCCATTAGGTGCGACG
CCCGGCAAGAATGGCTGGCAGGGCAAGTGGTTTCCCCATGCCCCTGGACA
ACAGCAGGAAGCGATTGAATTAAAAATGAAGAGCACCACGGAGGAAGTTC
CTCCGCTGGAGTTCACAACCAAGGATGGCTGGCAGGGCAAGTGGTTTCCA
CAAGCTCCCGGAGAGCCGCACTTGGTGAAGAAAAAACCGCTGGTCGATAA
CAAAACCAAGTCGGGGAAGTCCACCACACAGGATACTTGGCAGGGTAAAT
TGTTTCCGCAGGGTCCCAATGAATCGCACAAGACTAAACAAAGCAGCTGT
GATGATGGCAAGAGCAATCTTGCCGTGGACTTCGATCCAAACGACATCCG
TGACAGCCTGAATTTCCTATGCATCAGTAGTAATCACAGCTTGTACCAAC
CGGATTTGTCCAGAGAAGCCATTCTTACGGAGCACTTTCTACCTAGCGCC
TATCTGCCGCCTGCCAAGTGCCTTAATGAGTCCATTAGCTACTCCCATCT
GCCTGCCACCAATGGCCCCTATCGCCCGATGCCCGCTGAATATGGCACCT
ATTCCTACTTGCCTCCTCAGCGATACGTGCGTAATCTGGCGGAAGGTGCC
ATCGTAATGCTCTACCATCCCTGCGCTTTTCCCGGCCAAGTGAAGCAGCT
GCAAGACATCGTGGGTGGCTGTCTGTATCGCCATCTGGTGTCACCCTCGC
TGGCTCTGAGTCCGCAGCGACCGCTGGCCCTGCTCGCATGAGTCGCAGCC
TCGAGATGTCCGTCGTGATCGACGACTGGCGGCGGACTTCATCAGAAACA
CGTCAAGCAGGACCACTTGCATCGGAAGAATGTCGCGTTTGAATGTCAAG
AAAAGACTTACAAGAAGGTCCTTCTTAAGGGAGCACACTTGTTCAACTGC
GGAAGACTA
FMO08911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12093-RA | 1296 | CG12093-RA | 106..1200 | 9..1097 | 5115 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2773399..2773902 | 512..9 | 2520 | 100 | Minus |
3L | 28110227 | 3L | 2772656..2773046 | 1097..713 | 1445 | 94.9 | Minus |
3L | 28110227 | 3L | 2773105..2773306 | 712..511 | 1010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:43:32 has no hits.
FMO08911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:57 Download gff for
FMO08911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12093-RA | 92..1174 | 1..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:39 Download gff for
FMO08911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12093-RA | 98..1180 | 1..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:26 Download gff for
FMO08911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12093-RA | 98..1180 | 1..1077 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:26 Download gff for
FMO08911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2772676..2773046 | 713..1077 | 95 | <- | Minus |
3L | 2773105..2773304 | 513..712 | 100 | <- | Minus |
3L | 2773399..2773910 | 1..512 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:39 Download gff for
FMO08911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2772676..2773046 | 713..1077 | 95 | <- | Minus |
arm_3L | 2773105..2773304 | 513..712 | 100 | <- | Minus |
arm_3L | 2773399..2773910 | 1..512 | 99 | | Minus |