Clone FMO08912 Report

Search the DGRC for FMO08912

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:89
Well:12
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32462-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08912.5prime Sequence

876 bp (876 high quality bases) assembled on 2010-08-03

> FMO08912.5prime
CAGTCGACATGGAAACAGGTGGCACCTGGAAAATGTGGAAACTGTGGAAA
ATTTGCAGCGAGGAGTGTGCCAGTACCGGCGGCATATTAAGGCGGCTGGG
GCAGACTGCTTTGCTGTCAGCGCGGAGCGAGTCAATGACCTGGCTGACGC
CGTCCAACTGTCTGCCGATCTGGAGCCAGCGGCTGGGCCGCAACTGCGTC
GCTGCTCGGAGCCAGAACTTCGACGTGGAGCTGACGGGACGACTCTGGTC
GCTGTCGGGCGGACTGCATCCGAGGGCTCCTTGGTTCGACCGGAAGGTGC
GTGGGCATCAAACGCTCGGATGCTGCGTGGTGGCCTGTTGTGTGGCCAGT
ACATTCCGCCACCTTGGCGAGTGGAGCGGAAAGCTGCTGGACGCCATCGT
GGTTAATGGAAACCGCTACTTCCGCGCCAGCGTGGAGCAGAGCGAGCGTT
GGGACCTTCATTCGGGTGTGGACGATGCCAGGTGCAACTTGAGCTGGTGG
CCTTCGGGCTCCCCAGCCAGTAGAGAAATGAGTTCGCTAGAGGGCCTCAA
CTACTTCTTCACGCGCTTTCAGTTTGGCCTGCTGGAGTGCCAGGAGCGTC
GCTTCTCCTTCGGGCACAGCTCCAGCCGCGATGGTGGCTACTTCCTGTTC
GACTGTTCCGCGTGGGCCGAAGCCCTATTCCCGGACGACATGGGCGCCTT
CTACGTGATGCTGGCCAAGCATTTGCAGATGCTACTCTACTGCGTGGTGG
TCACGCTCAATGTGCGGCGCCGAAATGTCGAGTTCCGGCTTTATAACGTG
GACGTGGCCCGATTGCCCGGTGATGCCCGAAAATGCAGTTGCGAATCTGA
AGCGAAAAGCAAGCTTTCTAGACCAT

FMO08912.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32462-RA 1243 CG32462-RA 265..1115 9..858 4230 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22852405..22853248 852..9 4220 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:12:20 has no hits.

FMO08912.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:56 Download gff for FMO08912.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32462-RA 263..1119 5..862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:40 Download gff for FMO08912.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32462-RA 263..1115 5..858 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:01 Download gff for FMO08912.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32462-RA 263..1115 5..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:01 Download gff for FMO08912.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22852398..22853250 5..858 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:40 Download gff for FMO08912.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22845498..22846350 5..858 99   Minus