FMO08913.5prime Sequence
1076 bp (768 high quality bases) assembled on 2010-08-03
> FMO08913.5prime
CAGTCGACATGTCCTTTAGCGAATCAAATGTTCATCAGTGGGCTTTATGT
GCCCTTGCGGGAGTAACCGGGTTTGTGTGTGGAGCCTTTGTCCAACAAGA
GGCGTCCATAAGGCAGCTGCTCCAGCAGATTCGAAGGGATCCCTATGTCT
ACCATCATCGTCACAAGTTATATCCGATGTTATCCACCTTTGGGACAGAC
CATGAGGCCCGTTTGTGGAATCGTCCTACTTCATGGGCCGACAAATTCAG
GGAGCTGGTATTATCACCGATCCTCGATTTAGTTAGTGCTACTGTGACGC
TGAAATGGGATTCGGCAACCACAACTGATCTGCTCGACCTAGTCAAGTAT
GGACTGCCCAGCACGGAGAACTTGTACGTCCATAAGGACTACGTGGTTTC
GCAGGACCTGCGCACGAACGGCGTCAGATGGATTTGTGAGCATTTCCGTG
GGGATTATCAAAGGGTATCGTCGGATGGAGGCGGATATAGCACCATGAAT
CTTCGCTACAATGATGTGTATGTGCTGAGCTGCGGTTCGATGAGCATATG
CAAGGCGTTCAAGCGGAAAATTTGGAACGATCTGGAGAACTACGTGTCCA
GCATGGCCAAGGAGTTTGGCTCAGTGTACGCCTACACTGGGCCGATATAC
ACCCCAACATGTTACGAGATTGGCAAATGGACCATGAAGTATGAGGTGTT
TGACTGGATTCCGATACCAGTGCCATCCCATTTCTTTAAGGTATTAATCG
TGGAGAGTGGAGTTCCGGGACCCCACCCTTCATGGAAGCATTTATCATCA
AAACAGGCCGAGGGGTTGGCGGCAAGTTGAATGACACCGCGTCAAGTAGG
CAAAATAGAGCGTTACCAAGGATTGCGATTTACAAAATCATGCACCCGTA
ATCCAATTCGGGAAGGACTCTTTTCCGGTGGACCCAGGGCTGGGCCGGCA
GGCTGAAGAAAATTCCTGAGCCTTTGTTACCATTTCTCCCGACCAGAAAT
ATAAATTAAATACATGCTTTCCAAGACCATTCTCTGGCCCCCGGGGCCCG
GGTAGATGGTCATAACTATAAATCCT
FMO08913.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl3-RA | 1114 | CG31679-RA | 45..1055 | 9..1012 | 4520 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2237146..2237975 | 1000..179 | 3435 | 96.5 | Minus |
| 2L | 23513712 | 2L | 2238037..2238207 | 179..9 | 855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:08 has no hits.
FMO08913.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:49 Download gff for
FMO08913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31679-RA | 39..1052 | 9..1015 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:51 Download gff for
FMO08913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl3-RA | 45..1055 | 9..1012 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:57 Download gff for
FMO08913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl3-RA | 45..1055 | 9..1012 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:57 Download gff for
FMO08913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2237135..2237974 | 180..1012 | 96 | <- | Minus |
| 2L | 2238037..2238207 | 9..179 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:51 Download gff for
FMO08913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2237135..2237974 | 180..1012 | 96 | <- | Minus |
| arm_2L | 2238037..2238207 | 9..179 | 100 | | Minus |
