Clone FMO08917 Report

Search the DGRC for FMO08917

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:89
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14561-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08917.5prime Sequence

608 bp (-90 high quality bases) assembled on 2010-08-03

> FMO08917.5prime
CAGTCGACATGGAGACCTCGGAAGCTCTGAATACGTGTGAGGAGGGAGAC
CAGCTGAACGGCTCCTTCCGCCTGCAGTGCTCGATGTCCTCCGTGGATAT
GGAGAGCGAGAGTGACCTCTCGCTGGCATTCGAGCGCGAGGAGCAAATAC
CGGATGGCGGCTGCGACGAGCTGCCGGCCTTCGAGATCCGCGCCTTCTCG
CCGCATGGACGCACCCCGTCGCCCATCGACGATCTCGATCTGTCGGACAT
CGAGACGCCCAAGCAGCCGCAGAGGCAGCATCTCCTTCCGGAAGAGGAAC
CCCAGAACGATCCTCAGTACGTTGCCCTACACGAGATAAACGCCCAGATC
AGCCCGCCCAATGACGCCGACGACTCCAACAGCTTGGAGACGATCTTCGA
GGGCGTTTTCCTGAGCACCCCGCCCCGCGATAAAGCTTCCAGCTCGGGCA
ATTCCCGATTTACGCCCAAGCGCGGACGTGCAAATCTCATCGAGCTGATG
GCCAACCGGCTGCACGGCGGCAAGGAGAACCAGTCGCCGGGAGCGCGAGT
CTCTGACCCGCATTTACCCTCGCCACTCAAGGACCCCACCGCAAGCTTTC
TAGACCAT

FMO08917.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14561-RB 1310 CG14561-RB 227..808 9..590 2880 99.7 Plus
CG14561-RA 1061 CG14561-RA 227..808 9..590 2880 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22066133..22066714 9..590 2880 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 20:10:09 has no hits.

FMO08917.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:47 Download gff for FMO08917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14561-RA 185..773 1..590 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:53 Download gff for FMO08917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14561-RA 220..808 1..590 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:20 Download gff for FMO08917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14561-RA 220..808 1..590 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:20 Download gff for FMO08917.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22066126..22066714 1..590 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:53 Download gff for FMO08917.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22059226..22059814 1..590 99   Plus