FMO08919.5prime Sequence
1211 bp (1020 high quality bases) assembled on 2010-08-03
> FMO08919.5prime
CAGTCGACATGGAATGTCAGGAACTCAAGCTCGTCACGGATAAAGAACTC
ATTGATAAGAATCTTGAAAAAGAGGAGCAAACATGCAACTTAGTCCCAGC
CTGGAGCCCTAGGAATCCCTTGGAAAACAGCATCGATTGCCGCGAGAAGT
CAATTGTGGAAAACATAAATGCAGACCAGGATGCCATTGCCAAAATCCAA
TATCTTAGTTCGGAACATGCCAAGCTGGATAAGTATTTAGATAATCAGGA
GCAGGATGAATCACTTCGCAAATATCTTGTCGTTGGAGTTCATTGGGTTT
CTCTGCTCACGGAACATGTGTTGAGCCATCCGTTTCTAGTATTGCGTTGG
CAGTGTCAGGTTTATAATGCCTCCAAGTGTTACCACTTGCATCCTTTTAC
CCTGCTGCCCTGTATTGTCCACTTGCACAGACGCCAAGGACTAATGACAC
TATGGAAGGGAATGGGCAGCTGCTTGCTTGTTCGTGGAATGTCCTGCGCC
ATTGACGATGTAATATCGAAACTCAGCAGTTGGCCCAAGGAATTGGATAG
TCGAACGACCTTAAAGCGATTTGGCCAGCATGTCCTTCTGAAATCTGTAA
GCATCGCTTTGGTTTTGCCCTTCCACACCGTTTCCTTGGTGAAGACAGTG
CAAAGCGGCATTGCCAGCGACAAAAACAGGACTTTTTTGATGTCCTTCGA
GAAGGTGGAGCTCGCATTTTCTCATGGAGGTCCCCGCAAAATACTCGAAT
GCTACCAACTTGGGCATTAATCGGTCCGAGTATTTCGATTGGCATTACAA
AGTATCTTCTTCAACCTGTTAATACATGGCGTATCCACTCGAATGATGCA
GAGGAGAATGCTGTGAAAATCGATGTGAAAAAACCCCGACAATAAGCTTG
AAAACCAAATGCGAAAACTTATGCCGGACTTATAGCCATGCTTACCACTG
AGGTTGTATTCTTCCCTCTCGAAAACCATATTGCATCGCCTAGAACTGCA
GGCCACCCGAACCATATCGATATCTTTGATTACTGGTTATTCAGTTGTTC
CCGGTTTTGCACGACCTATCGTGGATTATTCCATTGCTACCGGGTACCCG
TTTTTTCAGATGGAGCTTGCCTGGGACTCTACAAGGGCTTTCGAGCCATG
ATTTCTTCTCATTTGTTCGCACAGGGTTTGTCTATATATAAAACTGTGTC
CAAGTTGGACA
FMO08919.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5755-RA | 1553 | CG5755-RA | 125..1297 | 9..1196 | 5140 | 96.7 | Plus |
| CG8931-RA | 1454 | CG8931-RA | 326..852 | 279..807 | 375 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18096692..18097795 | 9..1117 | 4800 | 97.8 | Plus |
| X | 23542271 | X | 15984222..15984537 | 279..594 | 335 | 73.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:22:43 has no hits.
FMO08919.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:44 Download gff for
FMO08919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5755-RA | 125..1250 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:30:11 Download gff for
FMO08919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5755-RA | 125..1250 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:46 Download gff for
FMO08919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5755-RA | 125..1250 | 9..1143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:46 Download gff for
FMO08919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18096692..18097817 | 9..1143 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:30:11 Download gff for
FMO08919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18096692..18097817 | 9..1143 | 97 | | Plus |
