FMO08922.5prime Sequence
473 bp (473 high quality bases) assembled on 2010-08-03
> FMO08922.5prime
CAGTCGACATGCACAAAACCTGGAATAAGGCGTTCCACAAGCGCAAGCTG
TGGAGGAGCGTGTCCAAGCCCGGAAAGTTGGTGTACTACATGCAGCCGCT
AATCGAGCACTTGTTCGACACCTGGATGCAACCACTGCCCTTTCCGACGC
TCCTCAAGTTCATCTACAGCTGGGTGCTGATCTTCTTCATCATGATTCCG
ATGCTCTATCCGCTGCTCGTCCTCCTCTCCTACTACGGCATATTCCAGTA
CGCGGCGGAGGAGCACTTCGGACTGAAGACGCCCGATAAGTGGGACCTCC
TGGGCGCCGCCGCCAGGCTGTGGCACTTCGAGGTGACCAACAGGAAGTAT
CTCCTTCGACTATATGCGCATGGCTCTGTGGTTCGTCTTCAACTGAACCA
ACAGCCGGAGTCCTTCGATCCCTACTTGCGAATCCCGTTTGCGGGGGAGT
TGGCTGCAAGCTTTCTAGACCAT
FMO08922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11145-RA | 574 | CG11145-RA | 41..487 | 9..455 | 2175 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7428151..7428456 | 355..50 | 1485 | 99 | Minus |
| 2R | 25286936 | 2R | 7427992..7428091 | 455..356 | 500 | 100 | Minus |
| 2R | 25286936 | 2R | 7428512..7428553 | 50..9 | 195 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:02 has no hits.
FMO08922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:50 Download gff for
FMO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11145-RA | 34..487 | 2..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:18 Download gff for
FMO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11145-RA | 34..487 | 2..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:11 Download gff for
FMO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11145-RA | 34..487 | 2..455 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:11 Download gff for
FMO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7427990..7428091 | 356..460 | 96 | <- | Minus |
| 2R | 7428151..7428455 | 51..355 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:18 Download gff for
FMO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3315495..3315596 | 356..460 | 96 | <- | Minus |
| arm_2R | 3315656..3315960 | 51..355 | 99 | <- | Minus |
