FMO08923.5prime Sequence
1032 bp (914 high quality bases) assembled on 2010-08-03
> FMO08923.5prime
CAGTCGACATGAATCAATTCGGCCAGCCAAAGCAAACGCAGCAACAGGAT
TACGAACTACCCAATCCGCCAAATGACACCATATCAGCGCTGGAGTTTTC
ACCGCGATCGAGTTCCTGGAACGCAATCTGTGCCGGAAGTTGGGATAACA
CCGTGCGCATTTGGGAGGTGCAAGCGGACAGGCTGGTGCCCAAGGTCATG
AATTCGCTGGAGGGCACGCCATTCGATGTCACTTGGAACGACTCAGGCAA
CAAGGTATACCTGAGCGACTCCAGCGGCCAGGTGACTGAGTGGGACTTAG
AATCGAACCAGCTGAGAAAGGTGGGACTTCACGCAAGAGCTGCACGCACC
TGCCATTGGGTGGGCCCCTATTTGGCCACAACCTCATGGGACAAGTCCAT
TAGGTTCTGGGACCCGCGTGCTGCCATAGAACTCACCAGGATGGAGCTAC
CGGATCGTAGCTATGCCGCCGATGTGCTCAACGACGTGGCGGTGGTGGCC
TGCGGCGATCGGTCCATCCTGGCCTACACTCTGCGTGGCGGACCCGTGGA
GCAGGGGCGCATGAAGAGTCCGGGCGAGAGCAACACCCAAGTGCGATCGG
TGGCGCTCCACCAGAATAGAGATCTGACCAGCTGGCTTATTGCCAAGACG
AATGGCATGGTGTTCGATCAGAGCATGGCTCATCGTACGGTCAGTTTTCC
AATCAGGTGCCATCGACTGGGAGAATTCCGGCATCCTAGACGTCTATGCG
GTGAACGAAGTGAAGGTCAACATGGTGACGCAGCACATTGCCACGGTGGG
ATCGGATGGAGTGTTTTGCTTCTGGGACAGCCAGATGCGTTTCCAGGCTG
CTGGAAAGCAAGTTCATCCTCAGTCGATCACTAAGTGCGCCATCAGTGGC
GATGGCAAGCTCTTTGCGTATGCTCTGGGCCTACGATTGGTCCAAGGGAC
AGAGTACTCTGGATCCAGCATAAAACCCCACTATCCTGCGCCGTTTGAAA
CGAATGTTGCTGCCGCAGCTTTCCAGACCATT
FMO08923.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12782-RA | 1219 | CG12782-RA | 148..1156 | 8..1014 | 4770 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23264332..23264944 | 1014..404 | 2595 | 97.4 | Minus |
| 2R | 25286936 | 2R | 23265000..23265396 | 404..8 | 1985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:21 has no hits.
FMO08923.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:50 Download gff for
FMO08923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12782-RA | 135..1147 | 1..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:56 Download gff for
FMO08923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12782-RA | 144..1156 | 1..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:26 Download gff for
FMO08923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12782-RA | 144..1156 | 1..1014 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:26 Download gff for
FMO08923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23264332..23264943 | 405..1014 | 97 | <- | Minus |
| 2R | 23265000..23265400 | 1..404 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:56 Download gff for
FMO08923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19151855..19152466 | 405..1014 | 97 | <- | Minus |
| arm_2R | 19152523..19152923 | 1..404 | 99 | | Minus |
