FMO08928.5prime Sequence
1153 bp (1029 high quality bases) assembled on 2010-08-03
> FMO08928.5prime
CAGTCGACATGTTCAAGTCCAAGTCCTTCGATTTGGTCATTGAGGAAAAG
ACAAAGAAACCGGAACGGCTCTACCAACCTCGTCGGATGCGATGGCTTAA
ATATATCATCCTGCCGGCAGTCTTCTCCTTTGCGCTTCTGCTGATCCTGG
TCAATGTGGACTTCTCCGATAATAGTGAGGATTCCACGCATCTGGGCAAT
GACACATCGCTCATTATATCTGGCTATGGATTTGAAAATAACACACTGCG
CCGGGGATTTTTCTCCGGAGGAATTGCATTGCATAGCCTTGTCATCGAGA
ACTGCACCATAGTTCATATCAACGACGCAGCTTTTAATCAGGAAAGCACT
GTGAACATAACAAGCCTGCAGCTCATTAATGTGCAATTGGAAAACTTGAC
TGAATCTGCCCTGGAAGGTCTTCAAAAGCTTCAGAACTTTACTCTAGTCA
ATGAAAATAATCACTTCAGGCCATTTGGATTCCTCTCAGCTGTGGCTGAA
TCGTTAGTCAGTGCGGAAATCCACCAGTCACTAGCCGCGGCAATATCGTA
TTCAGTGTGCGATTTTTTGGGATCCCGGAATTTCCCACAGTTGAAATATT
TAGATCTGAGTGGCACACACTTGGACAAAAGCCTTATTAAAGAGTCCTTT
GACAATCTGCCCGCGTTGGAACAACTACTTCTAAGGAACTGTGGGTTGGG
CAACATCGAGTGGGAAATCGTGAGGCCAAGACTCAAATTGTTGCACTATT
TGGACTTGGGTGGAGCTCAAAAGACGGGCAACTATGAACATCAGTTGGAC
GTATCCGCGTTCTCTCCTGAGACAACTACTAACGCTGAAGAGATATCTAC
TATCCTAGCGAAGAGAGCGATGGCTCCAGAAGTAGTGGGCACCACTACAC
TAGGACCTACTACTTCCATAGAAATTTCACCACCATCAACACAAAGTACA
CAACACCCAAAGAAGAAAGTACATCTATGACAGAACACGATATTACACAC
CATCGCCAAAATGCGAGAGACTTTGCCAGGATCTAGAGTGCTCCAGATTA
CCACGATACGTGCATCTGCAGATTCTGGGAAATCGTCTGCAGAATGGTTA
CTGGTGGAAATCTCGCATCGACTTGACACTTCCCAAATTCTCTGGGTGTG
CAA
FMO08928.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14662-RA | 2000 | CG14662-RA | 170..1302 | 9..1125 | 5180 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4983017..4984063 | 1047..9 | 4900 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:55 has no hits.
FMO08928.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:34 Download gff for
FMO08928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14662-RA | 164..1274 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:12 Download gff for
FMO08928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14662-RA | 164..1274 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:07 Download gff for
FMO08928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14662-RA | 164..1274 | 1..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:07 Download gff for
FMO08928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4982959..4984069 | 1..1099 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:12 Download gff for
FMO08928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 808681..809791 | 1..1099 | 98 | | Minus |
