FMO08932.5prime Sequence
1075 bp (780 high quality bases) assembled on 2010-08-03
> FMO08932.5prime
CAGTCGACATGAGCAGTCTGATCAACTTCCTCAACCCAAAGCTTAAGCCC
TCCGTAGAGACCGATGCCGTCTGCGAGGATGGCTACACTGCGGCCAATCT
GGTGGCCGACGACGTCGAGCAGCTGGAGCGTGGATTCATGTGCTTCGCCG
TCTGCAAGCCGCCCATAGAGATCGTATTCGACTTCCCCAAGGCGGTGGAC
ATGAAGGTCATCAAGCTGTGGCCCTCCTGCGGAGCCCTACGATCCACTGC
CTTCGAGCTGCATGGACGACACGATGGTATCTGGGAAAGGGTTGCCTTCG
TACGCGATCTGGGGCGTGGCGTGGACTCGGTGACCTTCTGCTACCAGAGC
GACTACAACTCACGGAGCAGCTCCAACTCGGAGCAGAGCGAGAAGGTGTT
CTTCTTCAAGTCCGCCCACAAGATCCTTGCCAGCACAAACAGCGTCAAGG
TGGTGATCCGGGCCACGGAAAGGTGTCCTCCAGTGCTGAGGAAAGTTCAG
ATGTGGGGACTGCCCGCTCGTTCGCTGGACAAAGCCGATCGCGAGCTGGT
CAAGACCATCTGGAGCGAGATAAGCGATCCCTACGGCCAGAGGGACGCGG
CCCAAACGCCCACCGGGCAGAGATCACCACCGCGGAATGTTCCAGAGCTC
AGGGACCAGTCGACCTTCTCTATTCCTGAAGAGTTCCTCGACTCCATCAC
CTGGGAGCTAATGATCTTCCCCACCGTGCTGCCATCTGGAAAAGTGGTGG
ACCAGTCCACCATCGACAAGCACGCCGAGGAGGAGGCCTAGTGGGGTCGC
CAGCCCTCGGATCCGTTTACAGGCCTGGATTCATTGCGCAACGCAGGCTA
TTCTTCACCTGGCCCTAAAAGCGCGCATCGATAATTTCTCTTGGAGAATT
CGGAGCACTTCAAGGCGGTTGCCCCGTTTGCTGGGCACCTTCCGCCATCT
CGTCTTCACGTCTTCGATTTCGCTAGCAGCACTTGTTCAGCCGGGACAGA
TAGTCCGGGTTCCTGAACCTATTTCTGCACTGAATCACTCCTTCAATCAG
CTGCAGCGGATAGAATCTAGGTCCA
FMO08932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2218-RB | 2198 | CG2218-RB | 339..1392 | 9..1060 | 4620 | 96.4 | Plus |
| CG2218-RA | 2529 | CG2218-RA | 437..1490 | 9..1060 | 4620 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30427136..30427840 | 713..9 | 3510 | 99.9 | Minus |
| 3R | 32079331 | 3R | 30426466..30426815 | 1060..713 | 915 | 89.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:05 has no hits.
FMO08932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:32 Download gff for
FMO08932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2218-RA | 429..1454 | 1..1023 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:51 Download gff for
FMO08932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2218-RA | 429..1454 | 1..1023 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:57 Download gff for
FMO08932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2218-RA | 429..1454 | 1..1023 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:57 Download gff for
FMO08932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30426502..30426814 | 714..1023 | 91 | <- | Minus |
| 3R | 30427136..30427844 | 1..713 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:51 Download gff for
FMO08932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26252224..26252536 | 714..1023 | 91 | <- | Minus |
| arm_3R | 26252858..26253566 | 1..713 | 99 | | Minus |
