FMO08933.5prime Sequence
838 bp (837 high quality bases) assembled on 2010-08-03
> FMO08933.5prime
CAGTCGACATGGAACTGGAACGCGAACTGCCCACCGACGACGCCTCCGTG
GAGTTGGATGTGTCCGAACCATGGGGTGATGTGAGATCGTCAGATAGCCA
GCTTACCCTGAAGCAGAGTGAGAGCCAGGAGACGATAAGACCATTTGGGT
ATGAGTTAGCTGATCCATCCGAGCTTAGCTCCTACGACATTCACCTGGGT
CTTCTAGTAGAGAAGGGTTTAATTGACATTAACTCATTGGACAAGCCCTC
GAACGAGGACCTTACAGACTATCCGGACTATCCGGGTCTTTTGTCCAGGT
CGGCGGATCGTAGTGGAATTGCTGAGATAGTCAAAGAAATGCGAAACGAA
TTCATGGACAAGCTGACCTCTAAGGCTAAGAGCTTCAAAGAAATCCTGAT
TAAGAAAGGCTTAATGGAGCCAAAGGACGAAAATCCTGCTATGCAGAAGA
ATGACTCTGAGAATAAAGCAAAGACCAAAGACGATTCTCAGATTCCAGAT
CGTAAGAACAAAGCGGGAAAACCTCTAGGAGAAGGCGACGTCAGACGAAA
TGGTGAACTCGCCCTGCTCATCAATGAAATCAATCAGTTTACTTCTGGCA
TGGAGCAAGATCCGGACACTGCGGACTGGGCTCGGTTCCGGGCCAACCTG
CTGAAAATACATAAGTACTATGTGAGCGTCAATGAGCCGGAAGGAAAAGG
CCAAGAACGACCAAACAGCCAAATCGGCGCTGTCAGCGTTTTTAGAACCA
TCATACATCAGCGGACCGAAGAAGACCTCAGCAGTCGGGCCCAGTACCTC
CGAAAAATCTCTGGGGTCTCGAATGCAAATGCTTACCC
FMO08933.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32459-RA | 1376 | CG32459-RA | 65..896 | 9..838 | 4035 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22855073..22855500 | 829..403 | 1965 | 98.8 | Minus |
| 3L | 28110227 | 3L | 22855792..22855995 | 212..9 | 1020 | 100 | Minus |
| 3L | 28110227 | 3L | 22855547..22855740 | 404..211 | 970 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:55 has no hits.
FMO08933.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:31 Download gff for
FMO08933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32459-RA | 74..912 | 1..838 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:47 Download gff for
FMO08933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32459-RA | 58..896 | 1..838 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:10 Download gff for
FMO08933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32459-RA | 58..896 | 1..838 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:10 Download gff for
FMO08933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22855063..22855498 | 405..838 | 98 | <- | Minus |
| 3L | 22855547..22855738 | 213..404 | 100 | <- | Minus |
| 3L | 22855792..22856002 | 1..212 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:47 Download gff for
FMO08933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22848163..22848598 | 405..838 | 98 | <- | Minus |
| arm_3L | 22848647..22848838 | 213..404 | 100 | <- | Minus |
| arm_3L | 22848892..22849102 | 1..212 | 98 | | Minus |
