FMO08937.5prime Sequence
819 bp (661 high quality bases) assembled on 2010-08-03
> FMO08937.5prime
TCTTCCATTACAAGCGCCCTGCCAGCGCTACAGATCCCGATTGGAGGACC
TCGTACTATCGAGGGCATCGCCACATTACAGACTTGAGAATGGGTAACAA
GCTGAACGCCAAGTTTACGGATAAGGGTATTTATGTAAAAGATCCGCTGC
TGTCCGAGAAGCCGACTTCTGAGTGCATGGCCAACTATGTGTGGCAGTAT
AACGATCCCAACGCACTTAGAAATCCCTCGCTCAACATGAAAACACAGTA
TATGAAACCATTTGAGGAGGGTTCCCTTCGCTTTGTAAAGCGAAAGATGA
AGCCCATTTCTAGTGTCAGTCATGAGTCGTATGTACTTAAGGAGCTGCCG
GAGGAACAGGAAATATTGCCTGTAACAATGCCCACTCCGGTGGTAGCCAC
CAAGCTATTCATCTTCCGTTCGGAGGCGTCCTTTAGCTAGTACCTTGATC
CCTCCTCCACCACATACAATCTGTCGTATGTGCGCTGGGGTCCCGAGGAC
TTGTGTGGCGGAGTAGCTGCCCACGACAATATTACATACTGGAATTGGAC
GGAGAAGATGCCGCCCATCCAGAAAGTATCCCGCGAAGAGGATCCTACAA
TGTGTGACGAGGGTAATACGCATAATTGCCCTAAGCGACGCTGTGAGTTT
CAAAAACCTCACCAAACGAGTGCCGCATTCGGGATGGTCACCGAGGTGCG
CGCTAATTTCACGGATCCTCATTTTCGAAGGGTTGATTCGATCAGAAGTA
AGCCTTACTCCTTGCACGAAGGAATCACTCCGTTTGCGGATAAAAGCGAA
TACCGCTTCAAAGATCGGG
FMO08937.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8292-RA | 1105 | CG8292-RA | 135..940 | 1..803 | 3640 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8217016..8217627 | 803..195 | 2530 | 96.1 | Minus |
| 2L | 23513712 | 2L | 8217687..8217883 | 197..1 | 970 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:58:54 has no hits.
FMO08937.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:27 Download gff for
FMO08937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8292-RA | 135..957 | 1..819 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:52 Download gff for
FMO08937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8292-RA | 135..957 | 1..819 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:54 Download gff for
FMO08937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8292-RA | 135..957 | 1..819 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:54 Download gff for
FMO08937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8216999..8217624 | 198..819 | 96 | <- | Minus |
| 2L | 8217687..8217883 | 1..197 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:52 Download gff for
FMO08937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8216999..8217624 | 198..819 | 96 | <- | Minus |
| arm_2L | 8217687..8217883 | 1..197 | 99 | | Minus |
