FMO08940.5prime Sequence
671 bp (671 high quality bases) assembled on 2010-08-03
> FMO08940.5prime
CAGTCGACATGGATTCGAATTGCGATTTATCGATGGTCAATGGTCAAACG
GAGCCCAAAGACCCAAAATGGGCGTCGTCGTCAACCCAGATAACTTCTCG
GGCATCGGAAACCTTTTCCGGAGTTGGCTCGGCGATAAGCACTGAAACGT
CCTTGCAGCCAGTGGCCGCGCCCACGATGTACTGCCTCCGATTGGCGCAG
CAGAGGCCGATAACCGAACGGCACGTCCACTTTCATGCCGGCGTTATCGA
TAACGAGCACATGAACCGGCGCAAATCGAAATGCTGCTGCATCTATCGAA
AGCCACATCCTTTCGGCGAGAGTTCGTCCTCCACGGACGACGAGTGCGAA
CACTGCTTTGGTCATCCCGAAGTGAGAACTCGCAATCGGTTGGAAAAACA
GCGGATACAGGAACAGCAAAACGGGTGCAGTTGCTGTCATCATCACCATC
GACTTCATAGTAATCGGAATAATCGACCGCCTACCGAAGAGATCGCGCAG
CATAAGGATGATCTGGCCAAAGAGGAACCAAAATCGGTAGTCAACAATGA
AAGTAGTCTAAAACTTTTAAACGAGGAAAATGTAAAATCATCTAAACCAG
AAAAAAAAAATAATTCAAATAACCGCCTCGAAGTAACTTTTGTAGAGCTT
GATGCAAGCTTTCTAGACCAT
FMO08940.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| I-3-RB | 813 | CG11233-RB | 86..730 | 9..653 | 3195 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20881897..20882541 | 653..9 | 3195 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-28 19:17:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 1203..1249 | 574..623 | 107 | 74 | Plus |
FMO08940.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:25 Download gff for
FMO08940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)19Ec-RB | 80..737 | 3..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:29 Download gff for
FMO08940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-3-RB | 80..737 | 3..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:26 Download gff for
FMO08940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-3-RB | 80..737 | 3..661 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:26 Download gff for
FMO08940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20881890..20882547 | 3..661 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:29 Download gff for
FMO08940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20752917..20753574 | 3..661 | 98 | | Minus |
