FMO08941.5prime Sequence
1164 bp (1056 high quality bases) assembled on 2010-08-03
> FMO08941.5prime
CAGTCGACATGAAGGTGATCAGCATTCGCTGGAAGACCTGCCTGCCAGGC
CTTATAATAGTTTCTTACCTGGTGTGTGCTCTGTTGTATTTCGGAATGGA
TATAACAAAGATTGAGCCAGTGGAACCAAGAGTAGTGAAAAACAAGACCA
AAGTGCCACGAATGTATGCCAAAACCATCAATCATGATGGCAACTGGGAG
ACTATTGTAACTAATCCGGAATTAAAGCCCAGATATCGGGTTGGCGGCGG
TAGGACTGGTGTCCAGTTCGTGATTGGAGTACCCACTGTACTGCGACCGA
AAAAGAACTATGTGCTCCAAACCGTGGACTGTCTGATCCGTCGAATGACT
CCGGAGCAGCGCGACAATTGTCTAATTGTTATATTCGTGGGTGAAACTAA
GCTGCAGTTCGCCAAGTTCATAGTAAGGGAACTGCGTGTGAATCATTCGA
CGCATATGCAAGCTGGCCTAATCGATGTCATTGCGCCACCCTTGAATTAC
TATCCCAACTTCTCGAGACTCCACATCACGCTGAACGATGATCCGCAGCG
AGTTCAGTGGAGGACCAAACAGAACCTGGACTACATATACCTGATGTCCT
ATGCTAAGAGCAGGGGTTTGTACTACCTGCAACTGGAGGACGATGTGATG
GCGAACGTGGGTTTCATGGACTACATCCAGAAGTTTGCAGTACTGCATGG
CAGCTTTCGGATTGCCCAGCAGATCGATTGGATTGTGATGAGCTTCAGTG
AGCTGGGCTTCATAGGGAAGCTCTTTCGCACCTCCGTGCTGAGCTCCTTC
GTGGCGTACCTCAAGTTGTTCTACAATGACCAGCCCATTGACTGGCTGCT
CCAGAGCTTCGTGACCCTGCAGAGCTGTCGCTGGGATAGTGTTTCCGATC
CCGAATGTCAGCGGGACTTCGAGTCCAGACTGCTGCGCTCCTCGCAATCC
CAGTTTCAGCATATGGGTGCACAATCGTCATTGGCGGATAGCAGCAATAT
CAAAAGGATGCCTTCTTTAACCATACTTTGGCAAGGCAGCGCTTGGAGCA
TCTGGCGAAGCCGCTCACTGATCGCCACCCATCGGGACCTCGCTGTGAAG
CATTATCCTCGACTGGTTAGAGGTGTTCGTTCTTCTGGATCTATATGCCC
ACGATGCTAGATGA
FMO08941.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17173-RA | 1581 | CG17173-RA | 8..1153 | 8..1149 | 5200 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14768197..14769276 | 1084..8 | 5075 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:37:33 has no hits.
FMO08941.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:22 Download gff for
FMO08941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17173-RA | 2..1046 | 4..1045 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:18 Download gff for
FMO08941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17173-RA | 2..1046 | 4..1045 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:54 Download gff for
FMO08941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17173-RA | 2..1046 | 4..1045 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:54 Download gff for
FMO08941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14768238..14769284 | 1..1045 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:18 Download gff for
FMO08941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14761338..14762384 | 1..1045 | 99 | | Minus |
