FMO08946.5prime Sequence
890 bp (890 high quality bases) assembled on 2010-08-03
> FMO08946.5prime
CAGTCGACATGGGAGAAGACAGTTCGAGGCGCCTCCCGCGCTGGTGGTTT
GGAGGGGTTTGCGCTGCAATCGCAGTCACCGGCACCCATCCGATTGATCT
CATCAAGGTACAGCTGCAGACCCAATCCCAAGCGGACCGGAAGACCGTGG
GGGAGATCCTTAAAGGCATACACGAGCGGAGCGGAATCTTGGGCTTTTAC
AATGGCATTTCGGCCTCCTGGTTTCGCCAGCTGACCTATACCACCACTCG
CTTCGCCTTGTACGAGGCCGGTAAGGACTACGTCGACACGCAAAAAGTTA
GTTCCAAGATGGCCCTGGCCACCTTTGCGGGAATCGTCGGTGGGATTGTG
GGTGTACCCGGGGACGTGGTCACAGTGCGACTCCAGAACGACGTCAAGTT
GCCGGAGGAGAAGCGACGTAACTACAAGCACGTTTTCGACGGCCTTTTCC
GCATCTACAAAGAGGAGGGCGTGTCCAGTCTCTTCCGCGGCACAGTGCCG
GCCGTTTCCAGGGCAGTCCTGCTGACCATCGGAACGAATGCAGCCTACGA
CCAAGTAAAGCAGATGCTCAAGATCGCAACGGGGGCAGGAGAGGGAGTAC
CACTGCACTTTGCCACATCCACGATAGCTGGATGCATTGCCGTGGTGATA
ACGCAGCCGCTCGATGTGATCAAGACGACTTTCATGAACGCCCAGCCGGG
GGAGTTCTCCCGGGATCGGAGGTGCTTTTTCTGAGTACCGCCAAACAGGC
CCATTGGCCTTCTACAAGGGATTCATTCCGGCCCTGATACGAGTGTCACC
CAATACGATTATCACCTTCGTTTTGTACGAGCAGGGCGCGAATGCGATTT
GGATATCTTGCCACCTGACAAGGCAAGCTTTCCTAGACAT
FMO08946.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-RA | 1001 | CG11196-RA | 42..902 | 9..872 | 4200 | 99.4 | Plus |
| Dic3-RB | 997 | CG11196-RB | 42..898 | 9..872 | 4130 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7994515..7994927 | 421..9 | 2065 | 100 | Minus |
| 2R | 25286936 | 2R | 7993897..7994344 | 872..422 | 2010 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:01 has no hits.
FMO08946.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:30 Download gff for
FMO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11196-RA | 36..902 | 1..872 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:50 Download gff for
FMO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 36..902 | 1..872 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:54 Download gff for
FMO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 36..902 | 1..872 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:54 Download gff for
FMO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7993897..7994344 | 422..872 | 98 | <- | Minus |
| 2R | 7994515..7994933 | 1..421 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:50 Download gff for
FMO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3881402..3881849 | 422..872 | 98 | <- | Minus |
| arm_2R | 3882020..3882438 | 1..421 | 99 | | Minus |
