FMO08955.5prime Sequence
1051 bp (1051 high quality bases) assembled on 2010-08-03
> FMO08955.5prime
CAGTCGACATGCATAAAATTGTTTGGTTTGGAACTTTAAATAAGTCGATT
GGCTACATCGGGAAAAAGAAGACCTGTCTTCTGAGTCCATGCGAGAAAAT
ATGCCTGAATTCAGCTAGAAAAACAGTACAGAGATGCGACAAAAACTATT
CACCACCAAAGTTAAGAAGAATCAAGAATTTCTATACCTACAGTGTTGTA
TTGGGGAGTCTCTTCAGTATAGTCATGTGGGCCATCTATAAGCTGGGCAA
GCCCGAGGAAGACCATCGGGGTCCCATAGAAGATGAGTTCAGTCAGCTTC
CCTGGTTCCGCCAGTACATAATGAGGATGTGGCACACACTTCAGTATTAT
GAAAAAATGATGGAAGAGCCCCAGATGGCAAGGCTGCTGCCAAATGTTGT
CCCACCGCCGTATATACAACCTCCCTATTCACTGGTGCTGGAAATCAAAG
ACGTACTGGTGCATCCAGATTGGACTTATCAGACGGGGTGGCGGTTTAAA
AAGCGGCCTGGTGTGGATTACTTTCTTCAGCAGTGCAGTCGAAATTTTGA
AATTGTAATATATACTTCTGAACAAGGTATGACCGCATTCCCCCTTCTGG
ATGCTTTAGATCCCTATGGCTACATAAAATATCGGCTAGTAAGAGGTGCC
ACGGACTTGGTAGAGGGTCAGCATACCAAGAACCTCGATTATCTTAACAG
GGATCTGAGCCGTGTGATAGTGGTGGACTGTGATCCGTATACCACTCCCC
TGCATCCCGATAATAGCTTGGTGCTCACAAAGTGGCTGGGTAACGATGAT
GATGTCCAGCTCTTTGATCTCACGGCTTTCCTGCAGTTGATTGCCGAACA
CCAAGTAAATGATGTAAGGGAGGTGCTGCGATACTATCGCCAATTCGAGG
ACCCATGGAACAGTTTAAGGACAACCAACGTCGACTGCAGGAGCAGAGTC
AGAAAGCATTCAGAATTTACCAACTAGTGAACGTCAGTGGAACTTAACTT
TATTGGGACGCTCCCTTCGAGGGTCTTCAATCAAAGCAAGCTTTCTAGAC
A
FMO08955.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-RA | 1107 | CG6691-RA | 57..1085 | 9..1035 | 5050 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22079688..22080716 | 9..1035 | 5000 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:03 has no hits.
FMO08955.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:06 Download gff for
FMO08955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 8..1054 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:27 Download gff for
FMO08955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 48..1094 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:24 Download gff for
FMO08955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 48..1094 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:24 Download gff for
FMO08955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22079679..22080719 | 1..1040 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:27 Download gff for
FMO08955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22079679..22080719 | 1..1040 | 98 | -> | Plus |
