FMO08957.5prime Sequence
932 bp (928 high quality bases) assembled on 2010-08-03
> FMO08957.5prime
CAGTCGACATGCTGTTCTCAAAGACGAATACCTCTTGTGCAAGTCGTATC
CAGTTTTTGGATAATGTAGAACACCGCTGCCAGTCAATGCTGAAGCTTAA
CGACCACAAGATGAACATGGAGTTGCCCAATGAAGTTCGGCCGCAGATCG
TCGGTATGGCCGGTGGGTACTCAAGAGAGAGTGGGAGTTCGGTGACAAGT
AGCAGTGGGCTGTCTAGTAAGAGAAGCTGCTTTATATCAACCTGCTATCC
TAAAGCTGAACGCAAGGCCTGTGTATCCGCTGACACATGTCATGTTAAAT
GCTGCGATGGGGAAGATAATCGTCCACCGTACGCTAGGATAATGCCCGAA
GATCGCCGATTTGGTGTAGTTATCACCAATGAGGAGTGTCCCTGCGACTG
TGACTTCAATTGCATTTTAGAGTTCATGGCAGAGGCATTCCATACTGCGC
AGGACGTCGCCTCCCTGAGCTTTAGTCAGTGTACTCCGGTAGCTGAATTC
GACTGCTCTTTGCTGCTCGTTGCCGAGGACAGTGACACCAGTGATTGGCT
TCTCCGGGTAGCCCGACCCATGTGTCCACCATACAGATGCACGTCATTCA
TCAAACACTTTGATCTGGTGCGGTCCATATTTGTTATTCCAATGATCGTG
GAACGAAGGCTCTGCAATGTCTTTCAAATATTTGAAAACCAAAACTGCGG
CATTGACACCGGAAAATGGTGCGTGATGGAATGGCTCCCTTTGGATCCTT
GCTCAGATTCATATGCATCGAAGGTAATCTTCCCGGATTCCACCACTATG
AGATCGTGGCTTACATCGACAACGAATCAAGGAATACATTGAGATTCACT
GCAGCAAGATAAAGTATATAACGTGGCCACTGCCTGTGGATTTCCCCCAA
GGCTGGTCTTGTACAGCAGCTTTCTAGACCTT
FMO08957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31948-RA | 1167 | CG31948-RA | 187..1095 | 9..915 | 4360 | 98.9 | Plus |
| CG31948-RB | 1362 | CG31948-RB | 340..1215 | 42..915 | 4195 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2415506..2416381 | 915..42 | 4115 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:22:25 has no hits.
FMO08957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:05 Download gff for
FMO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31948-RA | 184..1100 | 4..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:59 Download gff for
FMO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31948-RA | 184..1100 | 4..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:36 Download gff for
FMO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31948-RA | 184..1100 | 4..920 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:36 Download gff for
FMO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2415511..2416379 | 44..910 | 98 | <- | Minus |
| 2L | 2416436..2416473 | 4..43 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:59 Download gff for
FMO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2415511..2416379 | 44..910 | 98 | <- | Minus |
| arm_2L | 2416436..2416473 | 4..43 | 95 | | Minus |
