FMO08959.5prime Sequence
780 bp (780 high quality bases) assembled on 2010-08-03
> FMO08959.5prime
CAGTCGACATGAGAATGGACAAGTCGGAGAAACGCTCTAATCTTGCTGAT
AACTTCCTGTATATGTTGGAGTTCATGGTGGACGATCTGCTGATCACTCG
TCCCAACCTCTGCGCTCCGGAGGAGTATCCCACTTGCACGGAGATCACGT
TCCGTTCGGTTTTCCTGAACATTCGCGATCGGGAGAACGGAAGCTGTGTC
AACCCCTGTTCGCCCAAGTGCGGCAAGTGCACCCTCTTCACGCTGGAATC
GCCGATCACGGACGAGGACGTGATGCACATTCACGTTTACAAGAAGCGCA
CGGAGAGCTGCAAGTTCCTGCTCGGGCTGACCGAGCTGCCGATGAAGCCG
ATCTTCGACAGGGTAAAGAAGGAGTTCTATTCACAGAACATAAACTGGGA
GAGTAATGTCGAGTCCCATTTGTCGCGAATGTTTTTTGCTGAGGGGCCCC
TGCAAGAAGGCCAATGACTGTGTGTGCTACGAGAGGAATAGGGAGCGGCG
CGAACAGTGGTGTCCCACCTCAGAGCTGACCAAGCGGATGCTGCCGCTCT
TCAACCTCTGCAAGATGCAGACGGGCAATATAGTGCTGATCCTGAGACTG
GTGTGCAATGGGCCCTCTGTGGTATCCTCCTTCCCCGTCCAGAGACCAGT
GTGCAAGGATCCCTGCAACTGTTGCTGTCCTTGCCCGCCCACTTGGCCTG
CTCCCTGTTCGTCGCCATTCGATCCCTGCGATCCTTGCAAGACCGTGCCA
GCCAAGAAGACAGCAAGCTTTCTAGACCAT
FMO08959.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9129-RA | 1083 | CG9129-RA | 182..934 | 9..762 | 3595 | 98.5 | Plus |
| CG9133-RD | 3109 | CG9133-RD | 237..557 | 51..368 | 745 | 82.6 | Plus |
| CG9133-RC | 3036 | CG9133-RC | 237..557 | 51..368 | 745 | 82.6 | Plus |
| CG9133-RD | 3109 | CG9133-RD | 661..805 | 467..611 | 365 | 83.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1250877..1251629 | 9..762 | 3570 | 98.5 | Plus |
| 3L | 28110227 | 3L | 1252248..1252568 | 51..368 | 715 | 82.2 | Plus |
| 3L | 28110227 | 3L | 1252672..1252816 | 467..611 | 365 | 83.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:22:33 has no hits.
FMO08959.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:12 Download gff for
FMO08959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9129-RA | 182..934 | 9..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:30:04 Download gff for
FMO08959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9129-RA | 182..934 | 9..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:42 Download gff for
FMO08959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9129-RA | 182..934 | 9..762 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:42 Download gff for
FMO08959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1250877..1251629 | 9..762 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:30:04 Download gff for
FMO08959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1250877..1251629 | 9..762 | 98 | | Plus |
