FMO08961.5prime Sequence
572 bp (572 high quality bases) assembled on 2010-08-03
> FMO08961.5prime
CAATCGACATGAAAAACTCAACTGTGCAAGACAGTTCACCGCAAGTGCCA
CAGAATGGCATGGTCACCTATGGCAGCGGGCTCGTCTTTGGCGGGAAAGT
TTATCCGGTATTGGTGGACGGAAAGCCAATACAGCCACCCTTAGGTGCTC
ATCAGGCAGCAATGCAACAGCGCATGCAGATGCAGCAGGTTCAGCCACAG
GCGCCACATACCAACTGCCCCAAGTCCATTGTCCAACAACCTATATATCA
ACGAATGGAGACCCGGTATCCTGCACCCTCATACATGTCCAAGCCAAGCC
AACAGAGCTCTGTGAGTTGTCCTGGCCCAGTCATGGTGCAGCAGCACTCG
CCGTCTAACAATCTGGCGATGATGCAACCGTTGCAGGCGCATATTTTACA
GCGCCAGCAAATGCAAACCTCCATGGGCAGTCCTTGCGGCTACTACAACC
TGCCAACGAATGCGGGTGGTGATTCCTGCGGCTGGGACGGCTATGCCATG
ATGCAGCCAATGGATGCCAACAAGCCGTATACCTTTGGCTGGAGTCTTAC
CGATGCAAGCTTTCTAGACCAT
FMO08961.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12307-RA | 680 | CG12307-RA | 72..617 | 9..554 | 2670 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11651394..11651939 | 554..9 | 2670 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:02 has no hits.
FMO08961.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:58 Download gff for
FMO08961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12307-RA | 55..611 | 1..557 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:49 Download gff for
FMO08961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12307-RA | 64..617 | 1..554 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:56 Download gff for
FMO08961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12307-RA | 64..617 | 1..554 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:56 Download gff for
FMO08961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11651394..11651946 | 1..554 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:49 Download gff for
FMO08961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11651394..11651946 | 1..554 | 98 | | Minus |