FMO08965.5prime Sequence
1133 bp (922 high quality bases) assembled on 2010-08-03
> FMO08965.5prime
CAGTCGACATGAGACGTTTTCGGCCCATGAATCGTTCTTGGAATGCTCTG
CGTTCGCGTTCACGTTCACGTTCACGTTCGCGTTCGCCTTTCCGTTCGCA
ATCCATTACTCGATCCCGGCCCACCCGTTCGGATACCATTTACACAGAGA
GGACGCGATTGCAGCGACGTTTCAGTCGGCCTCCCTCCTCCTGGGACATT
CCACCAGAGGGTTATAACCACCTGACTCCGCAACAGTACAAGGCCATGCT
GGCCAGCGGCCAGATTGCCTCGAGGATTCTTTCCGATGGCGTACACGGGG
GCGAGTCCGCCGCGATTTCGATGATCACTCGACAAGCTCGCCGCCTGTAT
GTGGGTAATATTCCATTCGGAGTTACGGATGAGGAGATGATGCAGTTCTT
CAATCATCAGATCATGGCTCTGGGATTTGAAGCAAAAAGCTCGCACTACA
TGGATGGCAATGCTGTGCTGACCTGCCAAACGAATCTGGAGAAGAACTTT
GCCTTTCTGGAATTCCGATCCATTGACGAGGCCAGCCAGGCCTTGAATTT
CGATGGGATGGTCTTCCGTGGACAAATCTTGAAGATAAGACGGCCACACG
ACTATCAGCCAGTGCCCTCGATTTCAGTCTCTGCAATGGAGAGCTACAGG
TCATTCAGGGTCCCTGCCATCAATGTAGCCCAACAACCGGCTGTTACCCT
TCCTGTGACCACTATTGTCCCCGATTCTCCCAATAAGATCTTCGTACGTG
GCTTGCCCACCTGCCTGATCAGATCAGGTCAAGGAACTGCTGCAGTCGTT
TGGAGAACTGAAAGGACTGATTCTGGTGATGGATACAACACGAACCTGAA
ACAAGGTTTCGCCTTCTTTGAGTACTGCGATCCCTCGGTTACCGATCACG
CCATAGCTGGATTGCACGGCATGCTGCTGGGGGATCGCAAGCTGGTGGTC
CAGAGATCTATTCCAGGCGGAAAGAACGCATTTCTCCGGCACTTTACCAA
CCGTTCTTTCAGGAATGGGCAATATCACACTACAAGATCCTGGCTTCACC
TACCGAACTCTCTGGCTGTTGAAATGGTGCGTGGAAGAACTTGCTGATAG
AACATGAAGTTCTAGGAATTTTCTATGGAATAT
FMO08965.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LS2-RA | 1410 | CG3162-RA | 42..1117 | 9..1081 | 4870 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23210432..23211498 | 1073..9 | 4670 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:43:29 has no hits.
FMO08965.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:53 Download gff for
FMO08965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3162-RA | 39..1117 | 2..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:37 Download gff for
FMO08965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LS2-RA | 39..1117 | 2..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:25 Download gff for
FMO08965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LS2-RA | 39..1117 | 2..1081 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:25 Download gff for
FMO08965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23210423..23211501 | 2..1081 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:37 Download gff for
FMO08965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19097946..19099024 | 2..1081 | 97 | | Minus |
