FMO08969.5prime Sequence
888 bp (888 high quality bases) assembled on 2010-08-03
> FMO08969.5prime
CAGTCGACATGTCTAGTAGCAGTCGCCGCGTCATGTGGAAGCTCAACGAG
GAGGAGGAGACATTCGACTCCTTGGTCAATTATCGGCGGCTTCCTTCGCG
CAGCCTAAACCGAAGTCAGGTGACCGATGTGCCCACCAAGGGACACACTA
CCTCCGAAAATTGCCAGCTGCCAGCGCAAGAGTTGGAAACAAAGAGCGCC
ACCAACGAACAAGGTGCATTGGGCATAATGTCGGTTAGCCTACCGCAAAC
AACCAGGAATTCCCATCAATCGTCGGCCACGTCACTGCCGGAGGCCAAGG
GATGCACTGCCACCGAAAACTGCCAGTTGCTAGCGCAAGAGGCGGAAACA
AAGAACGCCAGCAACGAACAAGGTGGATTGGGCAAAATGTCGGTTAGCCT
GCCGCAACAAAACTGGAACGCCAATCAATCGTCGGCCACGTCACTGCCGG
AGGCCAAGGAGATCAGCTCCAAAGAGCAGGCGATCATCTACTGGCGGCGT
CTTTTCGATGGTATCCACAAGCGCCAGCGTGGCGAAAGAAAAGTTGCAGC
AATGCAGCCCGAAAATACCACAGATGTCGTGCTGACGTCCAAGCCAAACC
TGGCATTGCGCTACAAGCCCTCCCATGAGTCGCTTAAAAACAAGCGGATC
AAGGACCTGGCTCCTGAACGATGCCCGAGCACGTCCCGGGGATCAACGTC
CTGCAAACTGGTATCGGACCTCAGATGGAGACGTTCAGCCTGCCGCCGCA
GCAGACGTGTGTGGTGCGCGAGGTGGAGCCTCTGTTTGGCCAGCGCCGAC
CCATGTTGTTGGCCAACGACACGGATTCGTGCTACTCCCGGCGAGCTGGA
GGTCCCCAAAAACAGTCCCGTCCAGGAGCCAGGACTCT
FMO08969.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8136-RD | 1612 | CG8136-RD | 204..1080 | 9..885 | 4310 | 99.5 | Plus |
CG8136-RC | 1615 | CG8136-RC | 207..1083 | 9..885 | 4310 | 99.5 | Plus |
CG8136-RB | 1620 | CG8136-RB | 212..1088 | 9..885 | 4310 | 99.5 | Plus |
CG8136-RD | 1612 | CG8136-RD | 331..495 | 295..459 | 510 | 87.3 | Plus |
CG8136-RD | 1612 | CG8136-RD | 490..654 | 136..300 | 510 | 87.3 | Plus |
CG8136-RC | 1615 | CG8136-RC | 334..498 | 295..459 | 510 | 87.3 | Plus |
CG8136-RC | 1615 | CG8136-RC | 493..657 | 136..300 | 510 | 87.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8721643..8722519 | 9..885 | 4260 | 99.5 | Plus |
3R | 32079331 | 3R | 8721929..8722093 | 136..300 | 510 | 87.3 | Plus |
3R | 32079331 | 3R | 8721770..8721934 | 295..459 | 510 | 87.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:16:56 has no hits.
FMO08969.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:48 Download gff for
FMO08969.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8136-RC | 201..1086 | 1..888 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:24 Download gff for
FMO08969.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8136-RB | 206..1091 | 1..888 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:21 Download gff for
FMO08969.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8136-RB | 206..1091 | 1..888 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:21 Download gff for
FMO08969.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8721637..8722522 | 1..888 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:24 Download gff for
FMO08969.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4547359..4548244 | 1..888 | 98 | | Plus |